RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ZNRF2Q8NHG8 242 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 ZNF431Q8TF32 576 aaPredicted RBP9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 GNPNAT1Q96EK6 184 aaPredicted RBP9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 ZNF503Q96F45 646 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 C2orf50Q96LR7 162 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 ODF3Q96PU9 254 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 NACAE9PAV3 2078 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 PKHD1P08F94 4074 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 TRAV6A0A075B6T7 132 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 H3BQ15 152 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 CCSO14618 274 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 PLA2G10O15496 165 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 M6PRP20645 277 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 RPL29P47914 159 aaKnown RBP9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 GFI1BQ5VTD9 330 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 SAT2Q96F10 170 aaPredicted RBP9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 PYGO2Q9BRQ0 406 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 NUDT15Q9NV35 164 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 WDR83OSQ9Y284 106 aa9.53□□□□□ -0.88
SNRPA1-204ENST00000558020 DNAH17Q9UFH2 4485 aa9.52□□□□□ -0.88
SNRPA1-204ENST00000558020 PRAC2D3DTV9 90 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 H3BTX0 84 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 SLC17A3O00476 420 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 ZNF253O75346 499 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 SULT1A1P50225 295 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 ATP6V1FQ16864 119 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 MIC13Q5XKP0 118 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 SSX7Q7RTT5 188 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 RNF141Q8WVD5 230 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 SLC39A9Q9NUM3 307 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 PRELID1Q9Y255 219 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 LINC00588Q9Y4M8 146 aa9.52□□□□□ -0.89
SNRPA1-204ENST00000558020 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 TRAV26-1A0A087WT03 109 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 TRAV12-3A0A0B4J271 114 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 GAGE12BA1L429 117 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 FAM24AA6NFZ4 105 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 H3BNG1 76 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 MPDU1O75352 247 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 GAGE7O76087 117 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 SLC25A5P05141 298 aaKnown RBP9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 H2AFB2P0C5Z0 115 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 GAGE12FP0CL80 117 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 GAGE12GP0CL81 117 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 GAGE12IP0CL82 117 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 CT45A10P0DMU9 189 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 S100A10P60903 97 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 BAXQ07812 192 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 VWC2Q2TAL6 325 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 MORN5Q5VZ52 161 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 CHAC2Q8WUX2 184 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 Q9H8V8 135 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 TIMM9Q9Y5J7 89 aa9.51□□□□□ -0.89
SNRPA1-204ENST00000558020 PKD1P98161 4303 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 TRAV5A0A0B4J249 113 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 FAM240BA0A1B0GVZ2 78 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 J3KRW8 73 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 DAZ2Q13117 558 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 KIR3DS1Q14943 382 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 TTC32Q5I0X7 151 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 LINC00612Q8N6U2 182 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 LINC00477Q96M19 166 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 SEC22CQ9BRL7 303 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 CCDC32Q9BV29 185 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 PARD6GQ9BYG4 376 aaPredicted RBP9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 AAMDCQ9H7C9 122 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 ZNF586Q9NXT0 402 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 TMEM14CQ9P0S9 112 aa9.5□□□□□ -0.89
SNRPA1-204ENST00000558020 TRBV19A0A075B6N1 114 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 UBE2L5PA0A1B0GUS4 154 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 HIST1H1EP10412 219 aaKnown RBP9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 FGF7P21781 194 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 TNP2Q05952 138 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 PDE6HQ13956 83 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 ZNF680Q8NEM1 530 aa9.49□□□□□ -0.89
SNRPA1-204ENST00000558020 MUC4Q99102 2169 aa9.48□□□□□ -0.89
SNRPA1-204ENST00000558020 TRGV2A0A075B6R0 118 aa9.48□□□□□ -0.89
SNRPA1-204ENST00000558020 A0A0J9YY99 117 aa9.48□□□□□ -0.89
SNRPA1-204ENST00000558020 ZNF575Q86XF7 245 aa9.48□□□□□ -0.89
SNRPA1-204ENST00000558020 C11orf1Q9H5F2 150 aa9.48□□□□□ -0.89
SNRPA1-204ENST00000558020 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
SNRPA1-204ENST00000558020 C7orf71A4D174 169 aa9.47□□□□□ -0.89
SNRPA1-204ENST00000558020 GPX1P07203 203 aa9.47□□□□□ -0.89
SNRPA1-204ENST00000558020 NMBP08949 121 aa9.47□□□□□ -0.89
SNRPA1-204ENST00000558020 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
SNRPA1-204ENST00000558020 RAB32Q13637 225 aa9.47□□□□□ -0.89
SNRPA1-204ENST00000558020 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
SNRPA1-204ENST00000558020 SLC25A31Q9H0C2 315 aa9.47□□□□□ -0.89
SNRPA1-204ENST00000558020 A0A1W2PPQ1 181 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 IGSF23A1L1A6 192 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms