RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CNN1P51911 297 aaKnown RBP10.48□□□□□ -0.73
USP3-205ENST00000557884 TMEM41BQ5BJD5 291 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 OR8A1Q8NGG7 326 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 PHYHIPLQ96FC7 376 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 SLC35B3Q9H1N7 401 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 XCL2Q9UBD3 114 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
USP3-205ENST00000557884 M0R3E3 92 aa10.47□□□□□ -0.73
USP3-205ENST00000557884 ZNF253O75346 499 aa10.47□□□□□ -0.73
USP3-205ENST00000557884 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
USP3-205ENST00000557884 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
USP3-205ENST00000557884 PSG9Q00887 426 aa10.47□□□□□ -0.73
USP3-205ENST00000557884 PDE6HQ13956 83 aa10.47□□□□□ -0.73
USP3-205ENST00000557884 RAB24Q969Q5 203 aa10.47□□□□□ -0.73
USP3-205ENST00000557884 ARL14EPLP0DKL9 152 aa10.46□□□□□ -0.73
USP3-205ENST00000557884 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
USP3-205ENST00000557884 ICAM4Q14773 271 aa10.46□□□□□ -0.73
USP3-205ENST00000557884 LGALSLQ3ZCW2 172 aaPredicted RBP10.46□□□□□ -0.73
USP3-205ENST00000557884 AKR1C8PQ5T2L2 129 aa10.46□□□□□ -0.73
USP3-205ENST00000557884 SSX7Q7RTT5 188 aa10.46□□□□□ -0.73
USP3-205ENST00000557884 OR11H2Q8NH07 326 aa10.46□□□□□ -0.73
USP3-205ENST00000557884 ACTR3CQ9C0K3 210 aaPredicted RBP10.46□□□□□ -0.73
USP3-205ENST00000557884 AGRNO00468 2067 aa10.45□□□□□ -0.74
USP3-205ENST00000557884 AMTNQ6UX39 209 aa10.45□□□□□ -0.74
USP3-205ENST00000557884 PQLC2Q6ZP29 291 aa10.45□□□□□ -0.74
USP3-205ENST00000557884 CLUHP3Q96NS8 147 aa10.45□□□□□ -0.74
USP3-205ENST00000557884 AAMDCQ9H7C9 122 aa10.45□□□□□ -0.74
USP3-205ENST00000557884 PPP1R14DQ9NXH3 145 aa10.45□□□□□ -0.74
USP3-205ENST00000557884 A8MTW9 85 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 M0R2Z0 102 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 SPINK13Q1W4C9 94 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 ZFP69Q49AA0 526 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 IQCF2Q8IXL9 164 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 OR10J6PQ8NGY7 276 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 MRPL53Q96EL3 112 aaKnown RBP10.44□□□□□ -0.74
USP3-205ENST00000557884 HYLS1Q96M11 299 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 RARRES2Q99969 163 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 C1QTNF4Q9BXJ3 329 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 Q9H3A6 140 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 PRELID1Q9Y255 219 aa10.44□□□□□ -0.74
USP3-205ENST00000557884 GCHFRP30047 84 aa10.43□□□□□ -0.74
USP3-205ENST00000557884 CSNK1G2-AS1Q8NCQ2 148 aa10.43□□□□□ -0.74
USP3-205ENST00000557884 EDA2RQ9HAV5 297 aa10.43□□□□□ -0.74
USP3-205ENST00000557884 PLA2G2EQ9NZK7 142 aa10.43□□□□□ -0.74
USP3-205ENST00000557884 IGHV3OR16-12A0A075B7B8 117 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 IGKV2-40A0A087WW87 121 aaPredicted RBP10.42□□□□□ -0.74
USP3-205ENST00000557884 A0A0J9YWU9 116 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 CTXND1A0A1B0GTU2 59 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 BOLA2-SMG1P6H3BVE0 249 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 IGKV2D-40P01614 121 aaPredicted RBP10.42□□□□□ -0.74
USP3-205ENST00000557884 TPT1P13693 172 aaKnown RBP10.42□□□□□ -0.74
USP3-205ENST00000557884 FHITP49789 147 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 EIF5AP63241 154 aaKnown RBP10.42□□□□□ -0.74
USP3-205ENST00000557884 ERCC8Q13216 396 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 BAP18Q8IXM2 172 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 TMED6Q8WW62 240 aa10.42□□□□□ -0.74
USP3-205ENST00000557884 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
USP3-205ENST00000557884 DEFB4AO15263 64 aa10.41□□□□□ -0.74
USP3-205ENST00000557884 CXorf1O96002 111 aa10.41□□□□□ -0.74
USP3-205ENST00000557884 SEC11BP0C7V7 166 aa10.41□□□□□ -0.74
USP3-205ENST00000557884 CT45A10P0DMU9 189 aa10.41□□□□□ -0.74
USP3-205ENST00000557884 FGF8P55075 233 aaPredicted RBP10.41□□□□□ -0.74
USP3-205ENST00000557884 C9orf62Q8N4C0 152 aa10.41□□□□□ -0.74
USP3-205ENST00000557884 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
USP3-205ENST00000557884 MAP1LC3B2A6NCE7 125 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 PGPA6NDG6 321 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 NPIPB6E9PJ23 425 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 J3KRW8 73 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 CSN1S1P47710 185 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 NKX2-5P52952 324 aaPredicted RBP10.4□□□□□ -0.74
USP3-205ENST00000557884 LYPD1Q8N2G4 141 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 STOML3Q8TAV4 291 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 FAM213BQ8TBF2 198 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 IGF2BP2-AS1Q96M15 143 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 VGLL1Q99990 258 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 MAP1LC3BQ9GZQ8 125 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 TMPRSS5Q9H3S3 457 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 RPH3ALQ9UNE2 315 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 X6R8D5 127 aa10.4□□□□□ -0.74
USP3-205ENST00000557884 ZNF705EA8MWA4 302 aaPredicted RBP10.39□□□□□ -0.75
USP3-205ENST00000557884 CRXO43186 299 aaPredicted RBP10.39□□□□□ -0.75
USP3-205ENST00000557884 INSP01308 110 aa10.39□□□□□ -0.75
USP3-205ENST00000557884 AMBPP02760 352 aa10.39□□□□□ -0.75
USP3-205ENST00000557884 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
USP3-205ENST00000557884 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
USP3-205ENST00000557884 AGPAT4-IT1Q9H0P7 198 aa10.39□□□□□ -0.75
USP3-205ENST00000557884 TMEM167BQ9NRX6 74 aa10.39□□□□□ -0.75
USP3-205ENST00000557884 GOLT1BQ9Y3E0 138 aa10.39□□□□□ -0.75
USP3-205ENST00000557884 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 A0A1B0GV50 99 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 UMAD1C9J7I0 102 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 GNG5P63218 68 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 SLC51BQ86UW2 128 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 Q8NAQ8 132 aa10.38□□□□□ -0.75
USP3-205ENST00000557884 CMTM2Q8TAZ6 248 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms