RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MIC13Q5XKP0 118 aa9.97□□□□□ -0.81
SNX6-210ENST00000557341 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
SNX6-210ENST00000557341 STX12Q86Y82 276 aa9.97□□□□□ -0.81
SNX6-210ENST00000557341 RNASE8Q8TDE3 154 aaKnown RBP9.97□□□□□ -0.81
SNX6-210ENST00000557341 C11orf1Q9H5F2 150 aa9.97□□□□□ -0.81
SNX6-210ENST00000557341 DNAJC4Q9NNZ3 241 aa9.97□□□□□ -0.81
SNX6-210ENST00000557341 LYRM2Q9NU23 88 aaPredicted RBP9.97□□□□□ -0.81
SNX6-210ENST00000557341 FAM24AA6NFZ4 105 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 CBY3A6NI87 242 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 H2AFB2P0C5Z0 115 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 SULT1A1P50225 295 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 HBG1P69891 147 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 HBG2P69892 147 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 BAXQ07812 192 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 PARD6GQ9BYG4 376 aaPredicted RBP9.96□□□□□ -0.82
SNX6-210ENST00000557341 KRTAP17-1Q9BYP8 105 aa9.96□□□□□ -0.82
SNX6-210ENST00000557341 PRAC2D3DTV9 90 aa9.95□□□□□ -0.82
SNX6-210ENST00000557341 H3BQ15 152 aa9.95□□□□□ -0.82
SNX6-210ENST00000557341 NUDT3O95989 172 aa9.95□□□□□ -0.82
SNX6-210ENST00000557341 S100A11P31949 105 aa9.95□□□□□ -0.82
SNX6-210ENST00000557341 RAB32Q13637 225 aa9.95□□□□□ -0.82
SNX6-210ENST00000557341 GFI1BQ5VTD9 330 aa9.95□□□□□ -0.82
SNX6-210ENST00000557341 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
SNX6-210ENST00000557341 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
SNX6-210ENST00000557341 NOP10Q9NPE3 64 aaKnown RBP9.95□□□□□ -0.82
SNX6-210ENST00000557341 MUC4Q99102 2169 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 FAM240BA0A1B0GVZ2 78 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 IGSF23A1L1A6 192 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 ZNF253O75346 499 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 RPL29P47914 159 aaKnown RBP9.94□□□□□ -0.82
SNX6-210ENST00000557341 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 CCDC28AQ8IWP9 274 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 TMEM252Q8N6L7 170 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 SLC39A9Q9NUM3 307 aa9.94□□□□□ -0.82
SNX6-210ENST00000557341 TRAV5A0A0B4J249 113 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 NPIPB6E9PJ23 425 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 MPDU1O75352 247 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 MED14OSP0DP75 135 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 FGF7P21781 194 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 LEPP41159 167 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 CCL18P55774 89 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 MZT2BQ6NZ67 158 aa9.93□□□□□ -0.82
SNX6-210ENST00000557341 GPN1Q9HCN4 374 aaPredicted RBP9.93□□□□□ -0.82
SNX6-210ENST00000557341 DYNC1H1Q14204 4646 aaKnown RBP9.92□□□□□ -0.82
SNX6-210ENST00000557341 DNAH11Q96DT5 4516 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 SNURFLB1AK76 121 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 J3KRW8 73 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 IL15RAQ13261 267 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 ATP6V1FQ16864 119 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 LINC00299Q6ZSB3 139 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 CHAC2Q8WUX2 184 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 RNF141Q8WVD5 230 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 MRPL53Q96EL3 112 aaKnown RBP9.92□□□□□ -0.82
SNX6-210ENST00000557341 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
SNX6-210ENST00000557341 TRBV19A0A075B6N1 114 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 RLN2P04090 185 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 CT45A10P0DMU9 189 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 ASAH1Q13510 395 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 PDE6HQ13956 83 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 CLINT1Q14677 625 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 LINC00612Q8N6U2 182 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 S100ZQ8WXG8 99 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 PYGO2Q9BRQ0 406 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 TMEM14CQ9P0S9 112 aa9.91□□□□□ -0.82
SNX6-210ENST00000557341 NBDYA0A0U1RRE5 68 aa9.9□□□□□ -0.82
SNX6-210ENST00000557341 M0R3E3 92 aa9.9□□□□□ -0.82
SNX6-210ENST00000557341 GNPNAT1Q96EK6 184 aaPredicted RBP9.9□□□□□ -0.82
SNX6-210ENST00000557341 NPCDR1Q9BY65 106 aa9.9□□□□□ -0.82
SNX6-210ENST00000557341 PRELID1Q9Y255 219 aa9.9□□□□□ -0.82
SNX6-210ENST00000557341 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.82
SNX6-210ENST00000557341 TIMM9Q9Y5J7 89 aa9.9□□□□□ -0.82
SNX6-210ENST00000557341 TRAV26-1A0A087WT03 109 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 GAGE12BA1L429 117 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 GAGE7O76087 117 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 SLC25A5P05141 298 aaKnown RBP9.89□□□□□ -0.83
SNX6-210ENST00000557341 GAGE12FP0CL80 117 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 GAGE12GP0CL81 117 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 GAGE12IP0CL82 117 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 PYYP10082 97 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 HIST1H1EP10412 219 aaKnown RBP9.89□□□□□ -0.83
SNX6-210ENST00000557341 M6PRP20645 277 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 OR5I1Q13606 314 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 ENKURQ8TC29 256 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 AAMDCQ9H7C9 122 aa9.89□□□□□ -0.83
SNX6-210ENST00000557341 C7orf71A4D174 169 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 NDUFB4O95168 129 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 ZNF680Q8NEM1 530 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 OR5C1Q8NGR4 320 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 THAP6Q8TBB0 222 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 RXFP4Q8TDU9 374 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 BLNKQ8WV28 456 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 ZNF503Q96F45 646 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 SLC25A31Q9H0C2 315 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 KCNIP2Q9NS61 270 aa9.88□□□□□ -0.83
SNX6-210ENST00000557341 KLLNB2CW77 178 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms