RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 CKS2P33552 79 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 RPL27AP46776 148 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 TCTAP57738 103 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LYZP61626 148 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 WFDC2Q14508 124 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 C3AR1Q16581 482 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 C12orf74Q32Q52 190 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 MRPL51Q4U2R6 128 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 KLF17Q5JT82 389 aaPredicted RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ASPHD1Q5U4P2 390 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LYRM7Q5U5X0 104 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LYZL1Q6UWQ5 148 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ZNF562Q6V9R5 426 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LINC00696Q6ZRV3 163 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 Q6ZTC4 211 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 MOGAT3Q86VF5 341 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 PCP2Q8IVA1 136 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 TTC9CQ8N5M4 171 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LINC00311Q8N616 119 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 C8orf31Q8N9H6 132 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 TMEM178AQ8NBL3 297 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 TMEM116Q8NCL8 245 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ZNRF1Q8ND25 227 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 OR11H1Q8NG94 326 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 OR11H2Q8NH07 326 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 MYOZ3Q8TDC0 251 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ZNF418Q8TF45 676 aaPredicted RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 PHLDA1Q8WV24 401 aaPredicted RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ARPC1AQ92747 370 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ZC2HC1AQ96GY0 325 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ZNF479Q96JC4 524 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 GAFA1Q96PS6 74 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 SPAG8Q99932 426 aaPredicted RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 NAA38Q9BRA0 125 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 SRSF8Q9BRL6 282 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 CHAC1Q9BUX1 264 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 MRPL20Q9BYC9 149 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 HES7Q9BYE0 225 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 GEMIN7Q9H840 131 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 NGBQ9NPG2 151 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 NXT2Q9NPJ8 142 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 FSCN3Q9NQT6 498 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 SPANXA1Q9NS26 97 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 MRPL16Q9NX20 251 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 F11RQ9Y624 299 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LINC00312Q9Y6C7 94 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 YLPM1P49750 1951 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 CACNA1CQ13936 2221 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 TRBV19A0A075B6N1 114 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 TRBV25-1A0A075B6N4 114 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 TRAV26-1A0A087WT03 109 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 A0A096LNJ9 63 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 IGHV1-18A0A0C4DH31 117 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 A0A1B0GWB2 263 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 WI2-2373I1.2A0A1W2PRP0 233 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 NCBP2LA6PVI3 153 aaKnown RBP2.24□□□□□ -2.05
SLIRP-208ENST00000556956 NPIPB5A8MRT5 1133 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 TMEM262E9PQX1 116 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 H3BMG7 143 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 KLK10O43240 276 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 ENSAO43768 121 aaKnown RBP2.24□□□□□ -2.05
SLIRP-208ENST00000556956 SH2D1AO60880 128 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 CEACAM4O75871 244 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 GAS8-AS1O95177 125 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 GOSR1O95249 250 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 APOMO95445 188 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 IGLV2-23P01705 113 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 IGLV2-11P01706 119 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 IGKV1-16P04430 117 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 IL4P05112 153 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 SPINK8P0C7L1 97 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 FAM106CPP0CH98 169 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 GLRXP35754 106 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 LEPP41159 167 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 CRIP1P50238 77 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 CCL11P51671 97 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 CRYBA4P53673 196 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 FXYD2P54710 66 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 TNFAIP6P98066 277 aaPredicted RBP2.24□□□□□ -2.05
SLIRP-208ENST00000556956 WT1-ASQ06250 92 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 PAX8Q06710 450 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 LOXL1Q08397 574 aaPredicted RBP2.24□□□□□ -2.05
SLIRP-208ENST00000556956 KLRD1Q13241 179 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 PDE6HQ13956 83 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 RRN3P1Q2M238 152 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 C5orf64Q2M2E5 130 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 FAM106AQ4KMX7 169 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 TEX36Q5VZQ5 186 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 PMS2CLQ68D20 193 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 COX8CQ7Z4L0 72 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 GTSCR1Q86UQ5 136 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 AMN1Q8IY45 258 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 EXOC3-AS1Q8N2X6 119 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 Q8N8P6 123 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 CNEP1R1Q8N9A8 125 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 MDS2Q8NDY4 140 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 RND1Q92730 232 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 RPEQ96AT9 228 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 HIST1H4GQ99525 98 aa2.24□□□□□ -2.05
SLIRP-208ENST00000556956 CCL13Q99616 98 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms