RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 RPUSD4Q96CM3 377 aaKnown RBP16.43■□□□□ 0.22
PABPN1-206ENST00000556809 CLUHP3Q96NS8 147 aa16.43■□□□□ 0.22
PABPN1-206ENST00000556809 HMGB3O15347 200 aaKnown RBP16.42■□□□□ 0.22
PABPN1-206ENST00000556809 C4BPBP20851 252 aa16.42■□□□□ 0.22
PABPN1-206ENST00000556809 NUTF2P61970 127 aaKnown RBP16.42■□□□□ 0.22
PABPN1-206ENST00000556809 AKR1C8PQ5T2L2 129 aa16.42■□□□□ 0.22
PABPN1-206ENST00000556809 ZFAND6Q6FIF0 208 aa16.42■□□□□ 0.22
PABPN1-206ENST00000556809 PQLC2Q6ZP29 291 aa16.42■□□□□ 0.22
PABPN1-206ENST00000556809 OR4B1Q8NGF8 309 aa16.42■□□□□ 0.22
PABPN1-206ENST00000556809 RAB24Q969Q5 203 aa16.42■□□□□ 0.22
PABPN1-206ENST00000556809 ACTR3CQ9C0K3 210 aaPredicted RBP16.42■□□□□ 0.22
PABPN1-206ENST00000556809 DYNC2H1Q8NCM8 4307 aaKnown RBP16.41■□□□□ 0.22
PABPN1-206ENST00000556809 DUSP14O95147 198 aaKnown RBP16.41■□□□□ 0.22
PABPN1-206ENST00000556809 GIG44P09565 113 aaPredicted RBP16.41■□□□□ 0.22
PABPN1-206ENST00000556809 EIF5AP63241 154 aaKnown RBP16.41■□□□□ 0.22
PABPN1-206ENST00000556809 ZFP69Q49AA0 526 aa16.41■□□□□ 0.22
PABPN1-206ENST00000556809 ZNF705FA8MVS1 300 aaPredicted RBP16.4■□□□□ 0.22
PABPN1-206ENST00000556809 ZNF705DP0CH99 300 aaPredicted RBP16.4■□□□□ 0.22
PABPN1-206ENST00000556809 ZNF705BP0CI00 300 aaPredicted RBP16.4■□□□□ 0.22
PABPN1-206ENST00000556809 STAG3L2P0CL84 134 aa16.4■□□□□ 0.22
PABPN1-206ENST00000556809 STAG3L3P0CL85 134 aa16.4■□□□□ 0.22
PABPN1-206ENST00000556809 CNN1P51911 297 aaKnown RBP16.4■□□□□ 0.22
PABPN1-206ENST00000556809 OR8A1Q8NGG7 326 aa16.4■□□□□ 0.22
PABPN1-206ENST00000556809 MRPL53Q96EL3 112 aaKnown RBP16.4■□□□□ 0.22
PABPN1-206ENST00000556809 PHYHIPLQ96FC7 376 aa16.4■□□□□ 0.22
PABPN1-206ENST00000556809 AAMDCQ9H7C9 122 aa16.4■□□□□ 0.22
PABPN1-206ENST00000556809 A0A0J9YWU9 116 aa16.39■□□□□ 0.21
PABPN1-206ENST00000556809 A8MTW9 85 aa16.39■□□□□ 0.21
PABPN1-206ENST00000556809 SEC11BP0C7V7 166 aa16.39■□□□□ 0.21
PABPN1-206ENST00000556809 ARL14EPLP0DKL9 152 aa16.39■□□□□ 0.21
PABPN1-206ENST00000556809 PRB4P10163 310 aaPredicted RBP16.39■□□□□ 0.21
PABPN1-206ENST00000556809 TPT1P13693 172 aaKnown RBP16.39■□□□□ 0.21
PABPN1-206ENST00000556809 HIST1H1AQ02539 215 aaPredicted RBP16.39■□□□□ 0.21
PABPN1-206ENST00000556809 EXOC3-AS1Q8N2X6 119 aa16.39■□□□□ 0.21
PABPN1-206ENST00000556809 IL17DQ8TAD2 202 aa16.39■□□□□ 0.21
PABPN1-206ENST00000556809 PRELID1Q9Y255 219 aa16.39■□□□□ 0.21
PABPN1-206ENST00000556809 BAP18Q8IXM2 172 aa16.38■□□□□ 0.21
PABPN1-206ENST00000556809 STOML3Q8TAV4 291 aa16.38■□□□□ 0.21
PABPN1-206ENST00000556809 PRAC2D3DTV9 90 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 M0R3E3 92 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 ICAM4Q14773 271 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 ZNF726P1Q15940 193 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 SSX7Q7RTT5 188 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 C9orf62Q8N4C0 152 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 C1QTNF4Q9BXJ3 329 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 SLC35B3Q9H1N7 401 aa16.37■□□□□ 0.21
PABPN1-206ENST00000556809 CTXND1A0A1B0GTU2 59 aa16.36■□□□□ 0.21
PABPN1-206ENST00000556809 RANP62826 216 aaKnown RBP16.36■□□□□ 0.21
PABPN1-206ENST00000556809 AMTNQ6UX39 209 aa16.36■□□□□ 0.21
PABPN1-206ENST00000556809 LYPD1Q8N2G4 141 aa16.36■□□□□ 0.21
PABPN1-206ENST00000556809 RARRES2Q99969 163 aa16.36■□□□□ 0.21
PABPN1-206ENST00000556809 XCL2Q9UBD3 114 aa16.36■□□□□ 0.21
PABPN1-206ENST00000556809 RYR3Q15413 4870 aa16.35■□□□□ 0.21
PABPN1-206ENST00000556809 LYSTQ99698 3801 aa16.35■□□□□ 0.21
PABPN1-206ENST00000556809 CXorf1O96002 111 aa16.35■□□□□ 0.21
PABPN1-206ENST00000556809 GCHFRP30047 84 aa16.35■□□□□ 0.21
PABPN1-206ENST00000556809 FXYD7P58549 80 aa16.35■□□□□ 0.21
PABPN1-206ENST00000556809 OR10J6PQ8NGY7 276 aa16.35■□□□□ 0.21
PABPN1-206ENST00000556809 Q9H3A6 140 aa16.35■□□□□ 0.21
PABPN1-206ENST00000556809 UMAD1C9J7I0 102 aa16.34■□□□□ 0.21
PABPN1-206ENST00000556809 CSNK1G2-AS1Q8NCQ2 148 aa16.34■□□□□ 0.21
PABPN1-206ENST00000556809 OR11H2Q8NH07 326 aa16.34■□□□□ 0.21
PABPN1-206ENST00000556809 TMED6Q8WW62 240 aa16.34■□□□□ 0.21
PABPN1-206ENST00000556809 PLA2G2EQ9NZK7 142 aa16.34■□□□□ 0.21
PABPN1-206ENST00000556809 SLC51BQ86UW2 128 aa16.33■□□□□ 0.2
PABPN1-206ENST00000556809 SUN5Q8TC36 379 aa16.33■□□□□ 0.2
PABPN1-206ENST00000556809 TENM2Q9NT68 2774 aa16.33■□□□□ 0.2
PABPN1-206ENST00000556809 OTORQ9NRC9 128 aa16.32■□□□□ 0.2
PABPN1-206ENST00000556809 TMEM167BQ9NRX6 74 aa16.32■□□□□ 0.2
PABPN1-206ENST00000556809 PPP1R14DQ9NXH3 145 aa16.32■□□□□ 0.2
PABPN1-206ENST00000556809 NPIPB6E9PJ23 425 aa16.31■□□□□ 0.2
PABPN1-206ENST00000556809 BOLA2-SMG1P6H3BVE0 249 aa16.31■□□□□ 0.2
PABPN1-206ENST00000556809 FHITP49789 147 aa16.31■□□□□ 0.2
PABPN1-206ENST00000556809 SPINK13Q1W4C9 94 aa16.31■□□□□ 0.2
PABPN1-206ENST00000556809 EIF5AL1Q6IS14 154 aaKnown RBP16.31■□□□□ 0.2
PABPN1-206ENST00000556809 IQCF2Q8IXL9 164 aa16.31■□□□□ 0.2
PABPN1-206ENST00000556809 MAP1LC3B2A6NCE7 125 aa16.3■□□□□ 0.2
PABPN1-206ENST00000556809 M0R2Z0 102 aa16.3■□□□□ 0.2
PABPN1-206ENST00000556809 AMBPP02760 352 aa16.3■□□□□ 0.2
PABPN1-206ENST00000556809 CSN1S1P47710 185 aa16.3■□□□□ 0.2
PABPN1-206ENST00000556809 FAM74A1Q5RGS3 127 aa16.3■□□□□ 0.2
PABPN1-206ENST00000556809 MAP1LC3BQ9GZQ8 125 aa16.3■□□□□ 0.2
PABPN1-206ENST00000556809 C11orf68Q9H3H3 251 aaKnown RBP16.3■□□□□ 0.2
PABPN1-206ENST00000556809 SACSQ9NZJ4 4579 aa16.3■□□□□ 0.2
PABPN1-206ENST00000556809 PGPA6NDG6 321 aa16.29■□□□□ 0.2
PABPN1-206ENST00000556809 ZNF705EA8MWA4 302 aaPredicted RBP16.29■□□□□ 0.2
PABPN1-206ENST00000556809 NKX2-5P52952 324 aaPredicted RBP16.29■□□□□ 0.2
PABPN1-206ENST00000556809 FGF8P55075 233 aaPredicted RBP16.29■□□□□ 0.2
PABPN1-206ENST00000556809 DPPA3Q6W0C5 159 aa16.29■□□□□ 0.2
PABPN1-206ENST00000556809 FAM213BQ8TBF2 198 aa16.29■□□□□ 0.2
PABPN1-206ENST00000556809 RXFP4Q8TDU9 374 aa16.29■□□□□ 0.2
PABPN1-206ENST00000556809 IGKV2-40A0A087WW87 121 aaPredicted RBP16.28■□□□□ 0.2
PABPN1-206ENST00000556809 IGKV2D-40P01614 121 aaPredicted RBP16.28■□□□□ 0.2
PABPN1-206ENST00000556809 CMTM2Q8TAZ6 248 aa16.28■□□□□ 0.2
PABPN1-206ENST00000556809 IGF2BP2-AS1Q96M15 143 aa16.28■□□□□ 0.2
PABPN1-206ENST00000556809 X6R8D5 127 aa16.28■□□□□ 0.2
PABPN1-206ENST00000556809 CT45A10P0DMU9 189 aa16.27■□□□□ 0.2
PABPN1-206ENST00000556809 ERCC8Q13216 396 aa16.27■□□□□ 0.2
PABPN1-206ENST00000556809 Q8NAQ8 132 aa16.27■□□□□ 0.2
PABPN1-206ENST00000556809 ODF3Q96PU9 254 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms