RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FAM223BA6NKX1 122 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 SMAD7O15105 426 aaKnown RBP14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 APOHP02749 345 aaPredicted RBP14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 FRMD6-AS1P0C7T7 363 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 PRNTQ86SH4 94 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 FAM223AQ8IWN6 122 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 RNF24Q9Y225 148 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 ITPR3Q14573 2671 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 FMC1Q96HJ9 113 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 GPR82Q96P67 336 aa14.15□□□□□ -0.14
SDR39U1-220ENST00000556548 CLPSL1A2RUU4 121 aa14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 RPL7P18124 248 aaKnown RBP14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 ZFP30Q9Y2G7 519 aa14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 TYMSP04818 313 aa14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 IL17RELQ6ZVW7 336 aa14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 NUDT10Q8NFP7 164 aa14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 NUDT11Q96G61 164 aa14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 NAGKQ9UJ70 344 aa14.14□□□□□ -0.15
SDR39U1-220ENST00000556548 ARL3P36405 182 aa14.13□□□□□ -0.15
SDR39U1-220ENST00000556548 LINC00322Q6ZN03 302 aaPredicted RBP14.13□□□□□ -0.15
SDR39U1-220ENST00000556548 TLN2Q9Y4G6 2542 aa14.13□□□□□ -0.15
SDR39U1-220ENST00000556548 LTAP01374 205 aa14.13□□□□□ -0.15
SDR39U1-220ENST00000556548 IGLV2-11P01706 119 aa14.13□□□□□ -0.15
SDR39U1-220ENST00000556548 MBD6Q96DN6 1003 aa14.13□□□□□ -0.15
SDR39U1-220ENST00000556548 DUX5Q96PT3 197 aa14.13□□□□□ -0.15
SDR39U1-220ENST00000556548 FSHBP01225 129 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 HLA-DMBP28068 263 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 CDKN1BP46527 198 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 C10orf99Q6UWK7 81 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 RNASE8Q8TDE3 154 aaKnown RBP14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 MIEN1Q9BRT3 115 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 MLST8Q9BVC4 326 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 AAMDCQ9H7C9 122 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 TRAPPC1Q9Y5R8 145 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 BUB3O43684 328 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 ACTL10Q5JWF8 245 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 PRSS57Q6UWY2 283 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 Q86TA4 180 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 LYPD1Q8N2G4 141 aa14.12□□□□□ -0.15
SDR39U1-220ENST00000556548 ITPR2Q14571 2701 aa14.11□□□□□ -0.15
SDR39U1-220ENST00000556548 PDZD2O15018 2839 aa14.11□□□□□ -0.15
SDR39U1-220ENST00000556548 ZNF785A8K8V0 405 aa14.11□□□□□ -0.15
SDR39U1-220ENST00000556548 HOXA3O43365 443 aaPredicted RBP14.11□□□□□ -0.15
SDR39U1-220ENST00000556548 CBLN1P23435 193 aa14.11□□□□□ -0.15
SDR39U1-220ENST00000556548 COL5A1-AS1Q5SY13 56 aa14.11□□□□□ -0.15
SDR39U1-220ENST00000556548 GCN1Q92616 2671 aaKnown RBP14.11□□□□□ -0.15
SDR39U1-220ENST00000556548 DIRC3C9JPN6 131 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 GBGT1Q8N5D6 347 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 BTF3L4Q96K17 158 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 C20orf144Q9BQM9 153 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 RAB9AP51151 201 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 PDE6HQ13956 83 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 UNQ9165/PRO28630Q6UXU0 137 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 Q6YL49 198 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 METTL26Q96S19 204 aa14.1□□□□□ -0.15
SDR39U1-220ENST00000556548 ZNF705FA8MVS1 300 aaPredicted RBP14.09□□□□□ -0.15
SDR39U1-220ENST00000556548 IGLV1-40P01703 118 aa14.09□□□□□ -0.15
SDR39U1-220ENST00000556548 OR4X2Q8NGF9 303 aa14.09□□□□□ -0.15
SDR39U1-220ENST00000556548 ZNF705DP0CH99 300 aaPredicted RBP14.09□□□□□ -0.15
SDR39U1-220ENST00000556548 ZNF705BP0CI00 300 aaPredicted RBP14.09□□□□□ -0.15
SDR39U1-220ENST00000556548 FAM231DQ6ZW35 169 aa14.09□□□□□ -0.15
SDR39U1-220ENST00000556548 VPREB3Q9UKI3 123 aa14.09□□□□□ -0.15
SDR39U1-220ENST00000556548 IGKV2-40A0A087WW87 121 aaPredicted RBP14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 SMIM27A0A1W2PRY6 76 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 C20orf202A1L168 122 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 IGKV2D-40P01614 121 aaPredicted RBP14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 PSG9Q00887 426 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 CFHR3Q02985 330 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 BATFQ16520 125 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 MRPL54Q6P161 138 aaKnown RBP14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 USMG5Q96IX5 58 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 PSG8Q9UQ74 426 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 FLNAP21333 2647 aaKnown RBP14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 H3BUA1 57 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 PSG3Q16557 428 aa14.08□□□□□ -0.16
SDR39U1-220ENST00000556548 K7EQM0 130 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 S100A7P31151 101 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 CSN1S1P47710 185 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 RNF182Q8N6D2 247 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 TMEM75Q8N9X5 138 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 GRAMD2BQ96HH9 432 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 C9orf139Q6ZV77 190 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 SELENOKQ9Y6D0 94 aa14.07□□□□□ -0.16
SDR39U1-220ENST00000556548 IGHG4P01861 327 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 DAZAP1Q96EP5 407 aaKnown RBP14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 SMIM12Q96EX1 92 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 ZC2HC1AQ96GY0 325 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 ZNF331Q9NQX6 463 aaPredicted RBP14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 TRAV9-1A0A075B6T8 112 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 SNURFLB1AK76 121 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 P01737 135 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 C8orf49Q96NF6 230 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 AKAP9Q99996 3911 aa14.06□□□□□ -0.16
SDR39U1-220ENST00000556548 SONP18583 2426 aaKnown RBP14.05□□□□□ -0.16
SDR39U1-220ENST00000556548 UNC79Q9P2D8 2635 aa14.05□□□□□ -0.16
SDR39U1-220ENST00000556548 K7EP13 123 aa14.05□□□□□ -0.16
SDR39U1-220ENST00000556548 CHEK1O14757 476 aa14.05□□□□□ -0.16
SDR39U1-220ENST00000556548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.05□□□□□ -0.16
SDR39U1-220ENST00000556548 TCF24Q7RTU0 167 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms