RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 OCIAD2Q56VL3 154 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 PSMG4Q5JS54 123 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 NCMAPQ5T1S8 102 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 AADACL3Q5VUY0 350 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 C12orf73Q69YU5 71 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 MRPL54Q6P161 138 aaKnown RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 HAGHLQ6PII5 290 aaPredicted RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 Q6ZS49 121 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF550Q7Z398 422 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 DEFB128Q7Z7B8 93 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 C4orf33Q8N1A6 199 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 LINC00471Q8N535 108 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 SMIM20Q8N5G0 67 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 KCNRGQ8N5I3 272 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 DEFB125Q8N687 156 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 TEX29Q8N6K0 151 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 TMEM229BQ8NBD8 167 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 PLPP5Q8NEB5 264 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 OR4B1Q8NGF8 309 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 OR10AC1Q8NH08 325 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 MRPL30Q8TCC3 161 aaKnown RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF431Q8TF32 576 aaPredicted RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF418Q8TF45 676 aaPredicted RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 LCN9Q8WX39 176 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H2BHQ93079 126 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 ADAT3Q96EY9 351 aaPredicted RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 TEX37Q96LM6 180 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 TP53RKQ96S44 253 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 SDF2Q99470 211 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H2BNQ99877 126 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H2BMQ99879 126 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 SLC25A21Q9BQT8 299 aaPredicted RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 LINC00467Q9BRT7 94 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 PRADC1Q9BSG0 188 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 PARD6GQ9BYG4 376 aaPredicted RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 SMIM3Q9BZL3 60 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 LINC00470Q9BZP3 86 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 OR2H1Q9GZK4 316 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 NIT2Q9NQR4 276 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 SLC39A9Q9NUM3 307 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 IDI2-AS1Q9NZ38 188 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 METTL1Q9UBP6 276 aaKnown RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 NAT8BQ9UHF3 227 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 RABAC1Q9UI14 185 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 CYSLTR1Q9Y271 337 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 PRDM2Q13029 1718 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 TNRC6BQ9UPQ9 1833 aaKnown RBP0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 TMEM2Q9UHN6 1383 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 RALGAPA2Q2PPJ7 1873 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 ANAPC1Q9H1A4 1944 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 GRIN2AQ12879 1464 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 CEP164Q9UPV0 1460 aa0.54□□□□□ -2.32
SUPT16H-206ENST00000556309 SYNJ1O43426 1573 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 PCF11O94913 1555 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TRBV20OR9-2A0A075B6H5 130 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 A0A087X0T9 212 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TRAV14DV4A0A0A6YYC5 116 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 A0A0D9SG52 128 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TRBV7-6A0A0J9YX20 115 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 LOC107986453A0A1B0GWG9 222 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TRDV1A0A1B0GX56 115 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 C9orf170A2RU37 121 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 C7orf71A4D174 169 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 FAM24AA6NFZ4 105 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 A6NIN4 97 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 FABP5P3A8MUU1 101 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 LINC00587B1AMM8 73 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 C9JAW5 83 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 H3BQ15 152 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 APOC4-APOC2K7ER74 178 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 LYRM1O43325 122 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SSSCA1O60232 199 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H2BKO60814 126 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HYPMO75409 117 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 LYZL6O75951 148 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 APOC2P02655 101 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 GYPAP02724 150 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 C1QAP02745 245 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H2BJP06899 126 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SRP19P09132 144 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SMIM10L2AP0DMW4 78 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SMIM10L2BP0DMW5 78 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 FABP2P12104 132 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SLC25A4P12235 298 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 PIPP12273 146 aaPredicted RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 IFITM1P13164 125 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TPT1P13693 172 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 CRYGSP22914 178 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 NFYBP25208 207 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF93P35789 620 aaPredicted RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SNCAP37840 140 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 POLR2HP52434 150 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 ARPP19P56211 112 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SMIM11AP58511 58 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 DNAJB13P59910 316 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 S100A10P60903 97 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 RPS25P62851 125 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 UBE2BP63146 152 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms