RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 PRSS1P07477 247 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 ESDP10768 282 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 PRSS57Q6UWY2 283 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 UBTD1Q9HAC8 227 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 ERCC8Q13216 396 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 PRELID3AQ96N28 172 aa9.39□□□□□ -0.91
XRCC3-208ENST00000554811 COL27A1Q8IZC6 1860 aaPredicted RBP9.38□□□□□ -0.91
XRCC3-208ENST00000554811 LOC105371242A0A075B767 164 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 NDUFB8O95169 186 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 THYN1Q9P016 225 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 GOSR1O95249 250 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 LOXL1Q08397 574 aaPredicted RBP9.38□□□□□ -0.91
XRCC3-208ENST00000554811 FAM120AOSQ5T036 256 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 AMMECR1LQ6DCA0 310 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 Q8NA96 180 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 RAB1BQ9H0U4 201 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 C21orf62Q9NYP8 219 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 MFAP4P55083 255 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 FBLN7Q53RD9 439 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 NCOR1P1Q9H4R4 102 aa9.38□□□□□ -0.91
XRCC3-208ENST00000554811 TEX22C9J3V5 150 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 CEACAM3P40198 252 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 CTRLP40313 264 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 FAM162BQ5T6X4 162 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 OR10AG1Q8NH19 301 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 NAV2Q8IVL1 2488 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 LTAP01374 205 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 ARPC1AQ92747 370 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 NDPQ00604 133 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 LDLRAD2Q5SZI1 272 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 TMEM219Q86XT9 240 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 MSRB1Q9NZV6 116 aa9.37□□□□□ -0.91
XRCC3-208ENST00000554811 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 COX11Q9Y6N1 276 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 C7orf71A4D174 169 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 K7EMI3 77 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 SH2D1AO60880 128 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 ZNF491Q8N8L2 437 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 VGLL1Q99990 258 aa9.36□□□□□ -0.91
XRCC3-208ENST00000554811 FASNP49327 2511 aaKnown RBP9.35□□□□□ -0.91
XRCC3-208ENST00000554811 K7EIM0 57 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 NDFIP1Q9BT67 221 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 PSG3Q16557 428 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 SHANK2-AS3Q9BTD1 123 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 IGLV1-47P01700 117 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 CLEC3BP05452 202 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 RIPPLY3P57055 190 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 TCF15Q12870 199 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 TTTY13Q9BZ97 58 aa9.35□□□□□ -0.91
XRCC3-208ENST00000554811 G3V318 75 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 I3L2K1 104 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 GATA1P15976 413 aaPredicted RBP9.34□□□□□ -0.91
XRCC3-208ENST00000554811 CDSNQ15517 529 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 DLX6P56179 175 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 LINC00311Q8N616 119 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 GLMPQ8WWB7 406 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 LINC00574Q9H8X3 128 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 RAXQ9Y2V3 346 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 GCSHP23434 173 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 LY6EQ16553 131 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 C5orf64Q2M2E5 130 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
XRCC3-208ENST00000554811 A0A1B0GXF2 115 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 RASL11AQ6T310 242 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 MLST8Q9BVC4 326 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 ABCA12Q86UK0 2595 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 LY6DQ14210 128 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 WIPF2Q8TF74 440 aaPredicted RBP9.33□□□□□ -0.92
XRCC3-208ENST00000554811 ZNF414Q96IQ9 312 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 TMEM238C9JI98 176 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 IGHV3-11P01762 117 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 UBE2V1Q13404 147 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 SIGLEC15Q6ZMC9 328 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 CHCHD1Q96BP2 118 aaKnown RBP9.33□□□□□ -0.92
XRCC3-208ENST00000554811 CITED1Q99966 193 aa9.33□□□□□ -0.92
XRCC3-208ENST00000554811 C19orf71A6NCJ1 209 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 H3BUT2 72 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 SCGB2A1O75556 95 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 FSTL3O95633 263 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 DEFB1P60022 68 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
XRCC3-208ENST00000554811 CELSR1Q9NYQ6 3014 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 RPL7P18124 248 aaKnown RBP9.32□□□□□ -0.92
XRCC3-208ENST00000554811 SRD5A1P18405 259 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 MYCNOSP40205 109 aa9.32□□□□□ -0.92
XRCC3-208ENST00000554811 MRGPRG-AS1Q2M3A8 158 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms