RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 IGHV3-7P01780 117 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 CD14P08571 375 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 PYYP10082 97 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 SLC25A16P16260 332 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 AKR1C1Q04828 323 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 CATR1Q13166 79 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 IL17AQ16552 155 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 EIF5AL1Q6IS14 154 aaKnown RBP2.81□□□□□ -1.96
USP44-208ENST00000552440 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 DEFB123Q8N688 67 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 CNEP1R1Q8N9A8 125 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 OR10P1Q8NGE3 313 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 OR5D16Q8NGK9 328 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 RBPMSQ93062 196 aaKnown RBP2.81□□□□□ -1.96
USP44-208ENST00000552440 TXNL4BQ9NX01 149 aaKnown RBP2.81□□□□□ -1.96
USP44-208ENST00000552440 FANCMQ8IYD8 2048 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 CD163L1Q9NR16 1453 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 PCM1Q15154 2024 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 CCL5P13501 91 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 TMEM155Q4W5P6 130 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 ZNF322Q6U7Q0 402 aaPredicted RBP2.8□□□□□ -1.96
USP44-208ENST00000552440 ZNF705AQ6ZN79 300 aaPredicted RBP2.8□□□□□ -1.96
USP44-208ENST00000552440 AAED1Q7RTV5 226 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 PLPP5Q8NEB5 264 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 NFAT5O94916 1531 aa2.8□□□□□ -1.96
USP44-208ENST00000552440 NCKAP5O14513 1909 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 LRP4O75096 1905 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 C17orf51A8MQB3 221 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 H3BMM0 161 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 M0R129 80 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 LECT2O14960 151 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 IGHV1-69P01742 117 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 MT-ND6P03923 174 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 TRGC1P0CF51 173 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 ZNF883P0CG24 379 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 SNRPD3P62318 126 aaKnown RBP2.79□□□□□ -1.96
USP44-208ENST00000552440 C7orf65Q6ZTY9 151 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 GTSCR1Q86UQ5 136 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 OR4B1Q8NGF8 309 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 UBE2WQ96B02 151 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 RBMXL1Q96E39 390 aaKnown RBP2.79□□□□□ -1.96
USP44-208ENST00000552440 ZNF714Q96N38 554 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 TIAM2Q8IVF5 1701 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 DSCAMO60469 2012 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 CENPFP49454 3210 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 ZNF638Q14966 1978 aaKnown RBP2.79□□□□□ -1.96
USP44-208ENST00000552440 MYH7BA7E2Y1 1941 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 DOT1LQ8TEK3 1739 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 HTTP42858 3142 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 TRBV24-1A0A075B6N3 115 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 IGKV3D-20A0A0C4DH25 116 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 IGKV6D-41A0A0C4DH26 115 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 PNMA8CA0A1B0GUJ8 204 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 KLF7O75840 302 aaPredicted RBP2.79□□□□□ -1.96
USP44-208ENST00000552440 CD2P06729 351 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 SPINK8P0C7L1 97 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 FOXI2Q6ZQN5 318 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 ATOH7Q8N100 152 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 KCNRGQ8N5I3 272 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 CLDND2Q8NHS1 167 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 DIRC1Q969H9 104 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 LINC00574Q9H8X3 128 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 DNAJC15Q9Y5T4 150 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 ECM29Q5VYK3 1845 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 RGPD5Q99666 1765 aa2.79□□□□□ -1.96
USP44-208ENST00000552440 COL2A1P02458 1487 aaPredicted RBP2.78□□□□□ -1.96
USP44-208ENST00000552440 NOTCH3Q9UM47 2321 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 TRAV12-2A0A075B6T6 113 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 A0A0J9YW62 118 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 C3orf84H3BNL1 204 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 PHOX2AO14813 284 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 RER1O15258 196 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 SYNGR2O43760 224 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 LY6HO94772 140 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 HBDP02042 147 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 HIGD2BQ4VC39 106 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 TTC9CQ8N5M4 171 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 SIGLECL1Q8N7X8 197 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 C3orf56Q8N813 242 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 BPIFB6Q8NFQ5 453 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 TYMSOSQ8TAI1 123 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 MCEEQ96PE7 176 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 NAA60Q9H7X0 242 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 ZNF355PQ9NSJ1 428 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 OR5V1Q9UGF6 321 aa2.78□□□□□ -1.96
USP44-208ENST00000552440 FAM168BA1KXE4 195 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 GRIFINA4D1Z8 144 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 C19orf71A6NCJ1 209 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 NPYP01303 97 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 MIAQ16674 131 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 NOXRED1Q6NXP6 359 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 MRPL54Q6P161 138 aaKnown RBP2.77□□□□□ -1.97
USP44-208ENST00000552440 SOSTDC1Q6X4U4 206 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.77□□□□□ -1.97
USP44-208ENST00000552440 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 U3KQK5 164 aa2.77□□□□□ -1.97
USP44-208ENST00000552440 SIPA1L1O43166 1804 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms