RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SPIN2BQ9BPZ2 258 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 C1orf50Q9BV19 199 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 AICDAQ9GZX7 198 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 GPR84Q9NQS5 396 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 CYTL1Q9NRR1 136 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 WASHC3Q9Y3C0 194 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 FIS1Q9Y3D6 152 aa3.23□□□□□ -1.89
CPSF6-206ENST00000550987 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
CPSF6-206ENST00000550987 A0A087WX48 190 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 IGKV1-6A0A0C4DH72 117 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 OR4C45A6NMZ5 311 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 APOC4-APOC2K7ER74 178 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 CDS2O95674 445 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 IFNA17P01571 189 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 IGKV1-39P01597 117 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 APOC2P02655 101 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 IGKV1D-39P04432 117 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 IGKV3-11P04433 115 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 REG1AP05451 166 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 ATP5G1P05496 136 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 LGALS1P09382 135 aaKnown RBP3.22□□□□□ -1.89
CPSF6-206ENST00000550987 CXCL2P19875 107 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 S100A7P31151 101 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 S100A11P31949 105 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 HLA-DRB3P79483 266 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 HPCAP84074 193 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 FABP5Q01469 135 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 MYL5Q02045 173 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF816Q0VGE8 651 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-206ENST00000550987 IL15RAQ13261 267 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 EBI3Q14213 229 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 ZNF404Q494X3 552 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 PRSS54Q6PEW0 395 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 MORN3Q6PF18 240 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-206ENST00000550987 BAP18Q8IXM2 172 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 OR5H2Q8NGV7 314 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 TWIST2Q8WVJ9 160 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 SLC7A6Q92536 515 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 APOBEC3DQ96AK3 386 aaPredicted RBP3.22□□□□□ -1.89
CPSF6-206ENST00000550987 NIT2Q9NQR4 276 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 TMEM216Q9P0N5 145 aa3.22□□□□□ -1.89
CPSF6-206ENST00000550987 TRAV40A0A0B4J280 105 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 A0A1B0GXF2 115 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 C20orf202A1L168 122 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 CD300LBA8K4G0 201 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 H3BP45 60 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 UPK1AO00322 258 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 DEDDO75618 318 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 CXorf1O96002 111 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 C8GP07360 202 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 EVI2AP22794 236 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 G6PCP35575 357 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 SNRPD2P62316 118 aaKnown RBP3.21□□□□□ -1.9
CPSF6-206ENST00000550987 PPP3R1P63098 170 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 TNFAIP6P98066 277 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-206ENST00000550987 PSG9Q00887 426 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 MEF2CQ06413 473 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-206ENST00000550987 Q499Y3 187 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 NCMAPQ5T1S8 102 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 IBA57Q5T440 356 aaKnown RBP3.21□□□□□ -1.9
CPSF6-206ENST00000550987 SPATA31B1PQ5VZV4 182 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF101Q8IZC7 436 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 C8orf59Q8N0T1 100 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-206ENST00000550987 OR8B12Q8NGG6 310 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 OR51H1Q8NH63 302 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 TERB2Q8NHR7 220 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 C10orf105Q8TEF2 133 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 OR5P3Q8WZ94 311 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 REEP6Q96HR9 211 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF649Q9BS31 505 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 TRAPPC2LQ9UL33 140 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 MCTS1Q9ULC4 181 aaKnown RBP3.21□□□□□ -1.9
CPSF6-206ENST00000550987 PKIGQ9Y2B9 76 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 U3KQ87 197 aa3.21□□□□□ -1.9
CPSF6-206ENST00000550987 MEIKINA0A087WXM9 373 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 TRAV26-2A0A0B4J265 109 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 FAM236DA0A1B0GTK5 79 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 A0A1B0GVG6 124 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 DPRXA6NFQ7 191 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 F6UZH7 168 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 INMT-MINDY4F8WBC2 141 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.2□□□□□ -1.9
CPSF6-206ENST00000550987 OR7C2O60412 319 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 CA2P00918 260 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 IGHMP01871 453 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 GYPCP04921 128 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 FAM236CP0DP71 79 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 GADD45AP24522 165 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 CNTFRP26992 372 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 OR10J1P30954 320 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 TAS2R30P59541 319 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 NCS1P62166 190 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 FUT5Q11128 374 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 NXNL2Q5VZ03 156 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 SCIMPQ6UWF3 145 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 UNQ9165/PRO28630Q6UXU0 137 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 LINC00337Q8N6G1 96 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 ACBD7Q8N6N7 88 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 FNDC9Q8TBE3 224 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms