RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 OR2F1Q13607 317 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 CNPY1Q3B7I2 92 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 C1orf158Q8N1D5 194 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 MGST2Q99735 147 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 SLC25A21Q9BQT8 299 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-214ENST00000550893 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 TMED3Q9Y3Q3 217 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 U3KQ87 197 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 HLA-DRB4X5D2U9 266 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 MUC4Q99102 2169 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 LINC00854A0A1B0GVQ3 168 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 IGSF23A1L1A6 192 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 C7orf66A4D0T2 115 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 WRBO00258 174 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 UBE2CO00762 179 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 LYRM1O43325 122 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 SSSCA1O60232 199 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 CA1P00915 261 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-214ENST00000550893 NPPCP23582 126 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 S100GP29377 79 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 BMI1P35226 326 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 GPX4P36969 197 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-214ENST00000550893 EIF2B2P49770 351 aaKnown RBP3.41□□□□□ -1.86
SCAF11-214ENST00000550893 SRPXP78539 464 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 VWC2Q2TAL6 325 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 PSMG4Q5JS54 123 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 OR8G2PQ6IF36 304 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 CEMP1Q6PRD7 247 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-214ENST00000550893 SIGLEC15Q6ZMC9 328 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 Q6ZRP5 223 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 STXBP6Q8NFX7 210 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 OR11H4Q8NGC9 324 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 METTL26Q96S19 204 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 RAB40CQ96S21 281 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 GINS3Q9BRX5 216 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 SLC35B3Q9H1N7 401 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 NRN1Q9NPD7 142 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 NUDT15Q9NV35 164 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 APLNQ9ULZ1 77 aa3.41□□□□□ -1.86
SCAF11-214ENST00000550893 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.86
SCAF11-214ENST00000550893 TRAV6A0A075B6T7 132 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 TRAV30A0A087WSZ9 112 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 A0A087X0K7 114 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 A0A0J9YX75 114 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 HELTA6NFD8 242 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 CCDC160A6NGH7 325 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 ZNF98A6NK75 572 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 CYB5BO43169 146 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 ATG12O94817 140 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 IFNA10P01566 189 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 TCRBP04435 133 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 METTL15P1P0C7V9 234 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 RD3LP0DJH9 198 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 APOC4P55056 127 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 H2BFSP57053 126 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 SLC38A11Q08AI6 406 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 ASAH1Q13510 395 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 C12orf74Q32Q52 190 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 ACTL10Q5JWF8 245 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 SPANXN2Q5MJ10 180 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 LAMTOR1Q6IAA8 161 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 ZNF767PQ75MW2 155 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 TMEM144Q7Z5S9 345 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 RNF182Q8N6D2 247 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 OR10G8Q8NGN5 311 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 OR11H2Q8NH07 326 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 OR1S1Q8NH92 325 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 RNASE11Q8TAA1 199 aaKnown RBP3.4□□□□□ -1.87
SCAF11-214ENST00000550893 GATAD1Q8WUU5 269 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 TMEM37Q8WXS4 190 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 SMIM8Q96KF7 97 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 SAV1Q9H4B6 383 aaPredicted RBP3.4□□□□□ -1.87
SCAF11-214ENST00000550893 RABAC1Q9UI14 185 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 RFNGQ9Y644 331 aa3.4□□□□□ -1.87
SCAF11-214ENST00000550893 NAP1L6A6NFF2 107 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 G3V3Q6 166 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 H3BQ15 152 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 NOL3O60936 208 aaKnown RBP3.39□□□□□ -1.87
SCAF11-214ENST00000550893 TSC22D2O75157 780 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 IGLC2P0DOY2 106 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 FAUP35544 74 aaKnown RBP3.39□□□□□ -1.87
SCAF11-214ENST00000550893 PSMB3P49720 205 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 SUB1P53999 127 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCAF11-214ENST00000550893 FXYD7P58549 80 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 AP3S2P59780 193 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 LYZP61626 148 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 RRAS2P62070 204 aaPredicted RBP3.39□□□□□ -1.87
SCAF11-214ENST00000550893 DLK1P80370 383 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 ZNF415Q09FC8 603 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 SPANXN5Q5MJ07 72 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 Q6ZQT7 251 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 CYP2G1PQ6ZSU1 146 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 OR11H7Q8NGC8 314 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 FAM167A-AS1Q96KT0 104 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 RARRES2Q99969 163 aa3.39□□□□□ -1.87
SCAF11-214ENST00000550893 C7orf50Q9BRJ6 194 aaKnown RBP3.39□□□□□ -1.87
SCAF11-214ENST00000550893 PDCD10Q9BUL8 212 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms