RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 GUK1Q16774 197 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 TMEM41BQ5BJD5 291 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 LINC00305Q7Z4B0 112 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 BPIFA4PQ86YQ2 179 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 OR8I2Q8N0Y5 310 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 OR10G4Q8NGN3 311 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 OR10G9Q8NGN4 311 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 OR10G7Q8NGN6 311 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 SPAG8Q99932 426 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-213ENST00000550629 SCRT1Q9BWW7 348 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 DOK5Q9P104 306 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 MLXQ9UH92 298 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 FUT9Q9Y231 359 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 MGAM2Q2M2H8 2515 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 A0A087X0K7 114 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 A0A1W2PPV4 95 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 OR4C46A6NHA9 309 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 APOHP02749 345 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-213ENST00000550629 IGLL1P15814 213 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-213ENST00000550629 RAB2AP61019 212 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 PAFAH1B2P68402 229 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 EGFEM1PQ0D2K5 195 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 KHDC3LQ587J8 217 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 GCSAMLQ5JQS6 135 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 AKR1C8PQ5T2L2 129 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 KPRPQ5T749 579 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-213ENST00000550629 FAM78BQ5VT40 261 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 SIGLEC15Q6ZMC9 328 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 PQLC2Q6ZP29 291 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 RBPMS2Q6ZRY4 209 aaKnown RBP4.29□□□□□ -1.72
SCAF11-213ENST00000550629 TCF24Q7RTU0 167 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 TMEM61Q8N0U2 210 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 RPP25LQ8N5L8 163 aaKnown RBP4.29□□□□□ -1.72
SCAF11-213ENST00000550629 NEXN-AS1Q8NBZ9 246 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 TMED6Q8WW62 240 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 UHRF2Q96PU4 802 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 FAM110AQ9BQ89 295 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 ACTR3CQ9C0K3 210 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-213ENST00000550629 HRH4Q9H3N8 390 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 NRN1Q9NPD7 142 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 RPRMQ9NS64 109 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 CLEC5AQ9NY25 188 aa4.29□□□□□ -1.72
SCAF11-213ENST00000550629 IGHV3-49A0A0A0MS15 119 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 TRAV1-1A0A0B4J248 108 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 CTXND1A0A1B0GTU2 59 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 IFITM10A6NMD0 228 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 ISLRO14498 428 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 ZNF253O75346 499 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 IGLC2P0DOY2 106 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 GP9P14770 177 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 AMTP48728 403 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 CDC34P49427 236 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-213ENST00000550629 SULT1A2P50226 295 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 PDE6HQ13956 83 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 LRRC20Q8TCA0 184 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 FAM167A-AS1Q96KT0 104 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 MS4A6AQ9H2W1 248 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 SLC25A22Q9H936 323 aa4.28□□□□□ -1.72
SCAF11-213ENST00000550629 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 IGHV3OR16-13A0A075B7E8 117 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 IGHV3-74A0A0B4J1X5 117 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 IGHV3-66A0A0C4DH42 116 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 TEX46H3BTG2 121 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 K7EQG2 157 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
SCAF11-213ENST00000550629 OR7C2O60412 319 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 CXorf1O96002 111 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 IFNA7P01567 189 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 STAG3L2P0CL84 134 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 STAG3L3P0CL85 134 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 HIST1H1EP10412 219 aaKnown RBP4.27□□□□□ -1.73
SCAF11-213ENST00000550629 EDN2P20800 178 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 ID1P41134 155 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 PSMB3P49720 205 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 SNRPD3P62318 126 aaKnown RBP4.27□□□□□ -1.73
SCAF11-213ENST00000550629 LEMD1Q68G75 181 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 FAM122CQ6P4D5 195 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 TEX261Q6UWH6 196 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 LCN15Q6UWW0 184 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 GTSCR1Q86UQ5 136 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 LYPD1Q8N2G4 141 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 ARL6IP6Q8N6S5 226 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 FAM213BQ8TBF2 198 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 SUN5Q8TC36 379 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 DCANP1Q8TF63 244 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 TMEM18Q96B42 140 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 FXYD5Q96DB9 178 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 SAT2Q96F10 170 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-213ENST00000550629 PAXXQ9BUH6 204 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 CTDSP1Q9GZU7 261 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 OR51M1Q9H341 326 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 TMEM167BQ9NRX6 74 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF256Q9Y2P7 627 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-213ENST00000550629 RFNGQ9Y644 331 aa4.27□□□□□ -1.73
SCAF11-213ENST00000550629 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms