RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 CCDC28AQ8IWP9 274 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 OR8I2Q8N0Y5 310 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 KLHL30-AS1Q8NEE0 82 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 RXFP4Q8TDU9 374 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 C4orf3Q8WVX3 66 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 TMEM190Q8WZ59 177 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 C20orf24Q9BUV8 137 aa4.67□□□□□ -1.66
DEPDC4-209ENST00000550587 IGHV4OR15-8A0A075B7B6 117 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 IGHV3OR16-8A0A075B7F1 116 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 A0A087WW49 117 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 A0A1W2PS18 150 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 C11orf94C9JXX5 98 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 LINC01619G3V211 115 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 H3BQ15 152 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 CCL24O00175 119 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 MRPS12O15235 138 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 PDE6DO43924 150 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 IGLC2P0DOY2 106 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 UBE2G2P60604 165 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 UBE2L3P68036 154 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 PDE6HQ13956 83 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 SOHLH1Q5JUK2 328 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 C10orf91Q5T1B1 145 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 C16orf54Q6UWD8 224 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 LYPD1Q8N2G4 141 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 OR11H1Q8NG94 326 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 OR1N2Q8NGR9 330 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 GRAMD2BQ96HH9 432 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 NARS2Q96I59 477 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 SEC11CQ9BY50 192 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 TMEM231Q9H6L2 316 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 DAZ1Q9NQZ3 744 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 ZNF586Q9NXT0 402 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 SMPXQ9UHP9 88 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 UFC1Q9Y3C8 167 aa4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 YTHDF2Q9Y5A9 579 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-209ENST00000550587 TRBV19A0A075B6N1 114 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 A0A087X0K7 114 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 IGHV7-4-1A0A0J9YVY3 117 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 A8MWP6 167 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 F6UZH7 168 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 F8W036 122 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF207O43670 478 aaKnown RBP4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF253O75346 499 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 NDUFB4O95168 129 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 APOHP02749 345 aaPredicted RBP4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 SFTA3P0C7M3 94 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 GALR1P47211 349 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 MEOX2P50222 304 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 INSL3P51460 131 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 RANP62826 216 aaKnown RBP4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 PSG9Q00887 426 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 FAM74A3Q4VXF1 159 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 C18orf65Q6ZTR6 163 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 ARL6IP6Q8N6S5 226 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 CYB561D1Q8N8Q1 229 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 BLNKQ8WV28 456 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 LINC00052Q96N35 136 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 TCEAL7Q9BRU2 100 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 OTORQ9NRC9 128 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 CARHSP1Q9Y2V2 147 aaKnown RBP4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 SMAD5-AS1Q9Y6J3 95 aa4.65□□□□□ -1.67
DEPDC4-209ENST00000550587 IGHV3OR16-13A0A075B7E8 117 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 IGHV3-74A0A0B4J1X5 117 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 TMEM213A2RRL7 107 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 PGPA6NDG6 321 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 HELTA6NFD8 242 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF785A8K8V0 405 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 CHEK1O14757 476 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 SNRPCP09234 159 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 BMI1P35226 326 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 ATP5G3P48201 142 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 SYNJ2BPP57105 145 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 FHL3Q13643 280 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 DEFB136Q30KP8 78 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 FAM90A2PQ658T7 463 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 SIGLEC15Q6ZMC9 328 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 GLMPQ8WWB7 406 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 HIST1H2BAQ96A08 127 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 C11orf52Q96A22 123 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 RPUSD4Q96CM3 377 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 RAX2Q96IS3 184 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 C17orf77Q96MU5 243 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 ELOVL1Q9BW60 279 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 RHPN1-AS1Q9BWJ2 59 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 CLEC5AQ9NY25 188 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 EPDR1Q9UM22 224 aa4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 PRKDCP78527 4128 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-209ENST00000550587 IGHV3-49A0A0A0MS15 119 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 IGHV3-66A0A0C4DH42 116 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 C2orf70A6NJV1 201 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 GGTLC3B5MD39 225 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 H3BTX0 84 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 APOC3P02656 99 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 S100A9P06702 114 aaKnown RBP4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 FOLR2P14207 255 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 ADCYAP1P18509 176 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 CBLN1P23435 193 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms