RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 LINC00527Q9UJ94 153 aa5.44□□□□□ -1.54
DEPDC4-208ENST00000549341 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 ZNF98A6NK75 572 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 K7EQM0 130 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 NDUFA4O00483 81 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 PPP1R2P9O14990 202 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 EIF3GO75821 320 aaKnown RBP eCLIP5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 MT-ND4LP03901 98 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 OR10J4P0C629 311 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 ADCYAP1P18509 176 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 ATF4P18848 351 aaPredicted RBP5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 AKR1C3P42330 323 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 GALR1P47211 349 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 CSN1S1P47710 185 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 ATP5G3P48201 142 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 CNN1P51911 297 aaKnown RBP5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 SUMO1P63165 101 aaKnown RBP5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 PSG9Q00887 426 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 PDE6HQ13956 83 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 GUCA2BQ16661 112 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 FAM106AQ4KMX7 169 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 C1orf194Q5T5A4 169 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 OR8I2Q8N0Y5 310 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 HIST1H2BAQ96A08 127 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 C11orf52Q96A22 123 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 FAM167A-AS1Q96KT0 104 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 NOL4LQ96MY1 436 aaPredicted RBP5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 DUX3Q96PT4 197 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 ELOVL1Q9BW60 279 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 CTDSP1Q9GZU7 261 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 PARLQ9H300 379 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 AAMDCQ9H7C9 122 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 BIN3Q9NQY0 253 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 CLEC5AQ9NY25 188 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 S4R3C0 116 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 FRAS1Q86XX4 4008 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
DEPDC4-208ENST00000549341 A0A087WWC5 75 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 TRAV5A0A0B4J249 113 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 SERTM2A0A1B0GWG4 89 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 HELTA6NFD8 242 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 NDUFB4O95168 129 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 SLC25A5P05141 298 aaKnown RBP5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 PYYP10082 97 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 TAS2R60P59551 318 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 UBE2G1P62253 170 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 RPL19P84098 196 aaKnown RBP5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 CFHR3Q02985 330 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 BTN1A1Q13410 526 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 KIAA0141Q14154 515 aaPredicted RBP5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 ADIRFQ15847 76 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 FAM90A2PQ658T7 463 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 ZNF343Q6P1L6 599 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 TOMM20LQ6UXN7 152 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 C18orf65Q6ZTR6 163 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 SBSPONQ8IVN8 264 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 ARL6IP6Q8N6S5 226 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 C5orf17Q8NAS9 161 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 BLNKQ8WV28 456 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 FXYD5Q96DB9 178 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 ANAPC16Q96DE5 110 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 BTF3L4Q96K17 158 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 OR5B12Q96R08 314 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 SDF2L1Q9HCN8 221 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 OTORQ9NRC9 128 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 PEF1Q9UBV8 284 aaKnown RBP5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 YTHDF2Q9Y5A9 579 aaKnown RBP5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 LY96Q9Y6Y9 160 aa5.42□□□□□ -1.54
DEPDC4-208ENST00000549341 C7orf77A4D0Y5 90 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 PGPA6NDG6 321 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 FBLL1A6NHQ2 334 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 ZNF785A8K8V0 405 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 C9JCJ5 164 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 PEX7O00628 323 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 GP9P14770 177 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 S100PP25815 95 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 CRYBB3P26998 211 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 PSMB8P28062 276 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 RANP62826 216 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 USF2Q15853 346 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 SAMD13Q5VXD3 122 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 KLHL30-AS1Q8NEE0 82 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 SMIM12Q96EX1 92 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 ZNF503Q96F45 646 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 UBE2E2Q96LR5 201 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 CCDC140Q96MF4 163 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 CHRDL1Q9BU40 450 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 C20orf24Q9BUV8 137 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 Q9H3A6 140 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 TUBA4BQ9H853 241 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 ZMAT4Q9H898 229 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 UFC1Q9Y3C8 167 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 SMAD5-AS1Q9Y6J3 95 aa5.41□□□□□ -1.54
DEPDC4-208ENST00000549341 CXorf65A6NEN9 183 aa5.4□□□□□ -1.54
DEPDC4-208ENST00000549341 K7EMT4 169 aa5.4□□□□□ -1.54
DEPDC4-208ENST00000549341 ZNF253O75346 499 aa5.4□□□□□ -1.54
DEPDC4-208ENST00000549341 IGHV3-11P01762 117 aa5.4□□□□□ -1.54
DEPDC4-208ENST00000549341 LGALS1P09382 135 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-208ENST00000549341 GNG4P50150 75 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms