RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ZNF98A6NK75 572 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 HMSDA8MTL9 139 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 C17orf112F2Z3M2 114 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 MPDU1O75352 247 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 B2MP61769 119 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 VWC2Q2TAL6 325 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 PXDC1Q5TGL8 231 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 MIC13Q5XKP0 118 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 INO80EQ8NBZ0 244 aaPredicted RBP8.13□□□□□ -1.11
RAB5C-203ENST00000546881 OR1L4Q8NGR5 311 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 CLUHP3Q96NS8 147 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 ATP5SQ99766 215 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 RSG1Q9BU20 258 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 SLC25A39Q9BZJ4 359 aaPredicted RBP8.13□□□□□ -1.11
RAB5C-203ENST00000546881 ARV1Q9H2C2 271 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 SLC25A32Q9H2D1 315 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 KCNIP2Q9NS61 270 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 RNF24Q9Y225 148 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 RYR1P21817 5038 aa8.13□□□□□ -1.11
RAB5C-203ENST00000546881 ZNF705GA8MUZ8 300 aaPredicted RBP8.12□□□□□ -1.11
RAB5C-203ENST00000546881 H3BRN7 92 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 MEOX2P50222 304 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 OPCMLQ14982 345 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 SAMD13Q5VXD3 122 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 C10orf113Q5VZT2 155 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 LINC00305Q7Z4B0 112 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 GPR82Q96P67 336 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 UHRF2Q96PU4 802 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 PFDN5Q99471 154 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 SHANK2-AS3Q9BTD1 123 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 NPCDR1Q9BY65 106 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
RAB5C-203ENST00000546881 RNF222A6NCQ9 220 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 M0R2Z0 102 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 PRM2P04554 102 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 RPL7P18124 248 aaKnown RBP8.11□□□□□ -1.11
RAB5C-203ENST00000546881 CXCL2P19875 107 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
RAB5C-203ENST00000546881 PLP1P60201 277 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 ZNF345Q14585 488 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 SPINK13Q1W4C9 94 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 LGALSLQ3ZCW2 172 aaPredicted RBP8.11□□□□□ -1.11
RAB5C-203ENST00000546881 IGFL4Q6B9Z1 124 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 LRRC20Q8TCA0 184 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 IGF2BP2-AS1Q96M15 143 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 WDR61Q9GZS3 305 aaKnown RBP8.11□□□□□ -1.11
RAB5C-203ENST00000546881 SLC39A9Q9NUM3 307 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 BOLA1Q9Y3E2 137 aa8.11□□□□□ -1.11
RAB5C-203ENST00000546881 ABCA13Q86UQ4 5058 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 NUDT3O95989 172 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 INSP01308 110 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 CNN1P51911 297 aaKnown RBP8.1□□□□□ -1.11
RAB5C-203ENST00000546881 IFITM2Q01629 132 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 C15orf53Q8NAA6 179 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 DNAJC4Q9NNZ3 241 aa8.1□□□□□ -1.11
RAB5C-203ENST00000546881 C16orf90A8MZG2 172 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 F5H768 121 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 ARPC5O15511 151 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 DUSP14O95147 198 aaKnown RBP8.09□□□□□ -1.11
RAB5C-203ENST00000546881 ZNF266Q14584 549 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 AMTNQ6UX39 209 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 PATE2Q6UY27 113 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 BAP18Q8IXM2 172 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 ZNF738Q8NE65 137 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 AQP10Q96PS8 301 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 NACAE9PAV3 2078 aa8.09□□□□□ -1.11
RAB5C-203ENST00000546881 MUC4Q99102 2169 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 TRAV12-2A0A075B6T6 113 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 LYRM9A8MSI8 78 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 RGS13O14921 159 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 HTN1P15515 57 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 FAM3BP58499 235 aaPredicted RBP8.08□□□□□ -1.12
RAB5C-203ENST00000546881 RHOBP62745 196 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 TNP2Q05952 138 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 FFAR4Q5NUL3 377 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 BPIFA4PQ86YQ2 179 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 KCNRGQ8N5I3 272 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 TMEM37Q8WXS4 190 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 C17orf77Q96MU5 243 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 PPP1R14DQ9NXH3 145 aa8.08□□□□□ -1.12
RAB5C-203ENST00000546881 TRAV8-2A0A0B4J237 113 aa8.07□□□□□ -1.12
RAB5C-203ENST00000546881 A8MTW9 85 aa8.07□□□□□ -1.12
RAB5C-203ENST00000546881 CRXO43186 299 aaPredicted RBP8.07□□□□□ -1.12
RAB5C-203ENST00000546881 SNRPCP09234 159 aaKnown RBP8.07□□□□□ -1.12
RAB5C-203ENST00000546881 PRB4P10163 310 aaPredicted RBP8.07□□□□□ -1.12
RAB5C-203ENST00000546881 AZU1P20160 251 aa8.07□□□□□ -1.12
RAB5C-203ENST00000546881 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
RAB5C-203ENST00000546881 GCSAMLQ5JQS6 135 aa8.07□□□□□ -1.12
RAB5C-203ENST00000546881 LINC01587Q99440 93 aa8.07□□□□□ -1.12
RAB5C-203ENST00000546881 WFDC1Q9HC57 220 aa8.07□□□□□ -1.12
RAB5C-203ENST00000546881 BORCS7-ASMTA0A0B4J1R7 106 aa8.06□□□□□ -1.12
RAB5C-203ENST00000546881 TRAV5A0A0B4J249 113 aa8.06□□□□□ -1.12
RAB5C-203ENST00000546881 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
RAB5C-203ENST00000546881 TMUB2Q71RG4 321 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms