RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 H3BQ15 152 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 M0R2N4 97 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 ZNF253O75346 499 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 PRM2P04554 102 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 SNRPCP09234 159 aaKnown RBP6.62□□□□□ -1.35
YBX3-218ENST00000546298 AZU1P20160 251 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 FGF7P21781 194 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 LEPP41159 167 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 CYCSP99999 105 aaKnown RBP6.62□□□□□ -1.35
YBX3-218ENST00000546298 SOHLH1Q5JUK2 328 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 ENKURQ8TC29 256 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 SLC25A31Q9H0C2 315 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 TMEM14CQ9P0S9 112 aa6.62□□□□□ -1.35
YBX3-218ENST00000546298 TRAV5A0A0B4J249 113 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 IGSF23A1L1A6 192 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 PLAC8L1A1L4L8 177 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 H3BTX0 84 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 SLC17A3O00476 420 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 PRAF2O60831 178 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 MORN5Q5VZ52 161 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 TMEM263Q8WUH6 116 aaKnown RBP6.61□□□□□ -1.35
YBX3-218ENST00000546298 MRPL53Q96EL3 112 aaKnown RBP6.61□□□□□ -1.35
YBX3-218ENST00000546298 SAT2Q96F10 170 aaPredicted RBP6.61□□□□□ -1.35
YBX3-218ENST00000546298 ODF3Q96PU9 254 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 KCNIP2Q9NS61 270 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 PRELID1Q9Y255 219 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 TIMM9Q9Y5J7 89 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
YBX3-218ENST00000546298 IGLV2-18A0A075B6J9 118 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 TRBV19A0A075B6N1 114 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 PRSS29PA6NIE9 313 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 PRAC2D3DTV9 90 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 E5RGE8 158 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 NPIPB6E9PJ23 425 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 UPK1BO75841 260 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 HIST1H1EP10412 219 aaKnown RBP6.6□□□□□ -1.35
YBX3-218ENST00000546298 PDE6HQ13956 83 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
YBX3-218ENST00000546298 NOP10Q9NPE3 64 aaKnown RBP6.6□□□□□ -1.35
YBX3-218ENST00000546298 ZNF586Q9NXT0 402 aa6.6□□□□□ -1.35
YBX3-218ENST00000546298 SNURFLB1AK76 121 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 INMT-MINDY4F8WBC2 141 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 NUDT3O95989 172 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 CT45A10P0DMU9 189 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 PRB4P10163 310 aaPredicted RBP6.59□□□□□ -1.35
YBX3-218ENST00000546298 CCL18P55774 89 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 FCN2Q15485 313 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 GFI1BQ5VTD9 330 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 Q6ZR54 194 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 RNASE8Q8TDE3 154 aaKnown RBP6.59□□□□□ -1.35
YBX3-218ENST00000546298 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 PYGO2Q9BRQ0 406 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 NPCDR1Q9BY65 106 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 NMES1Q9C002 83 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 AAMDCQ9H7C9 122 aa6.59□□□□□ -1.35
YBX3-218ENST00000546298 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
YBX3-218ENST00000546298 C17orf112F2Z3M2 114 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 RTL8CO15255 209 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 SIX6O95475 246 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 SLC25A5P05141 298 aaKnown RBP6.58□□□□□ -1.36
YBX3-218ENST00000546298 DEFA1P59665 94 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 DEFA3P59666 94 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 NHLH2Q02577 135 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 CLINT1Q14677 625 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 KIR3DS1Q14943 382 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 C1orf134Q5TEV5 83 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 OR5C1Q8NGR4 320 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 PARD6GQ9BYG4 376 aaPredicted RBP6.58□□□□□ -1.36
YBX3-218ENST00000546298 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
YBX3-218ENST00000546298 LYSTQ99698 3801 aa6.58□□□□□ -1.36
YBX3-218ENST00000546298 TRAV12-3A0A0B4J271 114 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 J3KRW8 73 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 NMBP08949 121 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 NBEAP1P0C6P0 100 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 DAZ2Q13117 558 aaKnown RBP6.57□□□□□ -1.36
YBX3-218ENST00000546298 OR5I1Q13606 314 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 LRRC37A5PQ49AS3 106 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 LINC00612Q8N6U2 182 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 THAP6Q8TBB0 222 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 BLNKQ8WV28 456 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 GNPNAT1Q96EK6 184 aaPredicted RBP6.57□□□□□ -1.36
YBX3-218ENST00000546298 ZNF503Q96F45 646 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 MRPL32Q9BYC8 188 aaKnown RBP6.57□□□□□ -1.36
YBX3-218ENST00000546298 OR51M1Q9H341 326 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 PTTG2Q9NZH5 202 aa6.57□□□□□ -1.36
YBX3-218ENST00000546298 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 C7orf71A4D174 169 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 A6NHS1 94 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 M0R3E3 92 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 SSNA1O43805 119 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 GAGE7O76087 117 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 NDUFB4O95168 129 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 GAGE12FP0CL80 117 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 GAGE12GP0CL81 117 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 GAGE12IP0CL82 117 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 PET100P0DJ07 73 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 PYYP10082 97 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 M6PRP20645 277 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms