RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SLC25A39Q9BZJ4 359 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-220ENST00000544550 PLCXD1Q9NUJ7 323 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 PSORS1C1Q9UIG5 152 aa2.68□□□□□ -1.98
SNHG1-220ENST00000544550 A0A0A6YYH2 397 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 TRAV1-2A0A0B4J238 106 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 IGHV3-38A0A0C4DH36 116 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 RBFOX3A6NFN3 312 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 A6NJ64 397 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 SNRPGP15A8MWD9 76 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 C9JCJ5 164 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 GABARAPH6UMI1 98 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 GABARAPO95166 117 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 CFDP00746 253 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-220ENST00000544550 TSHBP01222 138 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 IGKV1-39P01597 117 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 ORM1P02763 201 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 IGKV1D-39P04432 117 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 OR5AC1P0C628 307 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 PTHLHP12272 177 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 RAB3BP20337 219 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 HNRNPA3P51991 378 aaKnown RBP2.67□□□□□ -1.98
SNHG1-220ENST00000544550 AKR1C2P52895 323 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 SPCS3P61009 180 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 LYZP61626 148 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 RPL36AP83881 106 aaKnown RBP2.67□□□□□ -1.98
SNHG1-220ENST00000544550 HIST1H1AQ02539 215 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-220ENST00000544550 LAGE3Q14657 143 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 LINC01556Q5JQF7 62 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 DHRS11Q6UWP2 260 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 SH2D6Q7Z4S9 175 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 OR11H4Q8NGC9 324 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 OR4D5Q8NGN0 318 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 ACY3Q96HD9 319 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 TXNDC17Q9BRA2 123 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 PYGO2Q9BRQ0 406 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 IFT46Q9NQC8 304 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 EHFQ9NZC4 300 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 CACFD1Q9UGQ2 172 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 HHLA3Q9XRX5 114 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 FUT9Q9Y231 359 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 WDR83OSQ9Y284 106 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 LSM2Q9Y333 95 aaKnown RBP2.67□□□□□ -1.98
SNHG1-220ENST00000544550 DNAH8Q96JB1 4490 aa2.67□□□□□ -1.98
SNHG1-220ENST00000544550 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-220ENST00000544550 TRGV1A0A0A0MS02 117 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 IGLV9-49A0A0B4J1Y8 123 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 A0A0D9SG52 128 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 C5orf52A6NGY3 159 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 ZFP92A6NM28 416 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 K7EQD1 137 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 ATP5HO75947 161 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 CRYBA4P53673 196 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 TAS2R46P59540 309 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 FABP5Q01469 135 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 CD300CQ08708 224 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 MLLT11Q13015 90 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-220ENST00000544550 FFAR4Q5NUL3 377 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 Q6ZTI0 123 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 C8orf59Q8N0T1 100 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-220ENST00000544550 Q8N976 141 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 OR8A1Q8NGG7 326 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 RNASE11Q8TAA1 199 aaKnown RBP2.66□□□□□ -1.98
SNHG1-220ENST00000544550 CYGBQ8WWM9 190 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 RSG1Q9BU20 258 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 FXYD6Q9H0Q3 95 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 SLC25A22Q9H936 323 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 Q9HAA7 133 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 C8orf4Q9NR00 106 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 GSN-AS1Q9NRJ2 163 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 FKBP14Q9NWM8 211 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 TMEM56-RWDD3S4R434 201 aa2.66□□□□□ -1.98
SNHG1-220ENST00000544550 TRAV18A0A075B6X5 111 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 TRAV8-3A0A0A6YYJ7 113 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 TRAV8-6A0A0B4J262 113 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 TRGV4A0A0C4DH28 118 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 SPINK4O60575 86 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 PRAF2O60831 178 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 TSPAN5P62079 268 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 FGL1Q08830 312 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 TRIM16LQ309B1 348 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 TMEM182Q6ZP80 229 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-220ENST00000544550 NRARPQ7Z6K4 114 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 DHRSXQ8N5I4 330 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 OR5H2Q8NGV7 314 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 ATP6V0E2Q8NHE4 81 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 LRRC20Q8TCA0 184 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 BLNKQ8WV28 456 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 SLC35E1Q96K37 410 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 LINC01600Q96MT4 127 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 VGLL1Q99990 258 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 MRPL32Q9BYC8 188 aaKnown RBP2.65□□□□□ -1.99
SNHG1-220ENST00000544550 SLC25A31Q9H0C2 315 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-220ENST00000544550 RHBDL2Q9NX52 303 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 SCN3BQ9NY72 215 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 RNF24Q9Y225 148 aa2.65□□□□□ -1.99
SNHG1-220ENST00000544550 U3KQ87 197 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms