RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 C15orf65H3BRN8 121 aa15.59■□□□□ 0.09
SUDS3-204ENST00000543473 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.59■□□□□ 0.09
SUDS3-204ENST00000543473 IGKV3D-20A0A0C4DH25 116 aa15.59■□□□□ 0.09
SUDS3-204ENST00000543473 IGHV2-70DA0A0C4DH43 119 aa15.59■□□□□ 0.09
SUDS3-204ENST00000543473 OVOL1O14753 267 aa15.59■□□□□ 0.09
SUDS3-204ENST00000543473 SIGLEC15Q6ZMC9 328 aa15.59■□□□□ 0.09
SUDS3-204ENST00000543473 TMEM75Q8N9X5 138 aa15.59■□□□□ 0.09
SUDS3-204ENST00000543473 A0A1W2PPM0 123 aa15.58■□□□□ 0.09
SUDS3-204ENST00000543473 ZNF134P52741 427 aa15.58■□□□□ 0.09
SUDS3-204ENST00000543473 DEFB104AQ8WTQ1 72 aa15.58■□□□□ 0.09
SUDS3-204ENST00000543473 A0A0G2JNJ9 132 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 TMEM155Q4W5P6 130 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 DEFB125Q8N687 156 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 RNASE8Q8TDE3 154 aaKnown RBP15.58■□□□□ 0.08
SUDS3-204ENST00000543473 DPH3P1Q9H4G8 78 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 YAE1D1Q9NRH1 226 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 Q9UFV3 132 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 CD28P10747 220 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 PAX8Q06710 450 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 DUX3Q96PT4 197 aa15.58■□□□□ 0.08
SUDS3-204ENST00000543473 DTX1Q86Y01 620 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 TRBV7-9A0A0J9YWB2 115 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 PRSS46E5RG02 174 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 CNTFRP26992 372 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 TOMM7Q9P0U1 55 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 C5orf64Q2M2E5 130 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 C14orf178Q8N769 122 aaPredicted RBP15.57■□□□□ 0.08
SUDS3-204ENST00000543473 NCOR1P1Q9H4R4 102 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 KIF26AQ9ULI4 1882 aaPredicted RBP15.57■□□□□ 0.08
SUDS3-204ENST00000543473 BUB1B-PAK6H3BSN5 160 aa15.57■□□□□ 0.08
SUDS3-204ENST00000543473 M0R2P5 195 aa15.56■□□□□ 0.08
SUDS3-204ENST00000543473 WIPF2Q8TF74 440 aaPredicted RBP15.56■□□□□ 0.08
SUDS3-204ENST00000543473 SIGLEC8Q9NYZ4 499 aa15.56■□□□□ 0.08
SUDS3-204ENST00000543473 C2orf16Q68DN1 1984 aa15.56■□□□□ 0.08
SUDS3-204ENST00000543473 TRBV19A0A075B6N1 114 aa15.56■□□□□ 0.08
SUDS3-204ENST00000543473 WT1-ASQ06250 92 aa15.56■□□□□ 0.08
SUDS3-204ENST00000543473 MRPL51Q4U2R6 128 aaKnown RBP15.56■□□□□ 0.08
SUDS3-204ENST00000543473 LTBP2Q14767 1821 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.55■□□□□ 0.082e-7■■■□□ 17.5
SUDS3-204ENST00000543473 F8W1H4 67 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 KLF5Q13887 457 aaPredicted RBP15.55■□□□□ 0.08
SUDS3-204ENST00000543473 C17orf58Q2M2W7 97 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 Q6ZSR3 168 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 FXYD5Q96DB9 178 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 TMEM101Q96IK0 257 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 DENND4AQ7Z401 1863 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 ATXN8Q156A1 80 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 C8orf49Q96NF6 230 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 PLXNB3Q9ULL4 1909 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 LYPD2Q6UXB3 125 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 PLCE1Q9P212 2302 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 ZNF474Q6S9Z5 364 aaPredicted RBP15.55■□□□□ 0.08
SUDS3-204ENST00000543473 PRSS33Q8NF86 280 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 FAM208BQ5VWN6 2430 aa15.55■□□□□ 0.08
SUDS3-204ENST00000543473 A0A0U1RRA0 63 aa15.54■□□□□ 0.08
SUDS3-204ENST00000543473 CSTL1Q9H114 145 aa15.54■□□□□ 0.08
SUDS3-204ENST00000543473 PIP4P1Q86T03 277 aa15.54■□□□□ 0.08
SUDS3-204ENST00000543473 K7ENP7 123 aa15.54■□□□□ 0.08
SUDS3-204ENST00000543473 WFDC12Q8WWY7 111 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 LINC00527Q9UJ94 153 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 C9JAW5 83 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 SSBP2P81877 361 aaPredicted RBP15.53■□□□□ 0.08
SUDS3-204ENST00000543473 C2orf82Q6UX34 121 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 ZNF747Q9BV97 191 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 FGF23Q9GZV9 251 aaPredicted RBP15.53■□□□□ 0.08
SUDS3-204ENST00000543473 VCYO14598 125 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 ERCC8Q13216 396 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 ZNF672Q499Z4 452 aaPredicted RBP15.53■□□□□ 0.08
SUDS3-204ENST00000543473 PLEKHB2Q96CS7 222 aa15.53■□□□□ 0.08
SUDS3-204ENST00000543473 GAGE12HA6NDE8 117 aa15.52■□□□□ 0.08
SUDS3-204ENST00000543473 NBL1P41271 181 aa15.52■□□□□ 0.08
SUDS3-204ENST00000543473 PRR30Q53SZ7 412 aaPredicted RBP15.52■□□□□ 0.08
SUDS3-204ENST00000543473 KLRD1Q13241 179 aa15.52■□□□□ 0.08
SUDS3-204ENST00000543473 C9orf139Q6ZV77 190 aa15.52■□□□□ 0.08
SUDS3-204ENST00000543473 ZGRF1Q86YA3 2104 aa15.52■□□□□ 0.08
SUDS3-204ENST00000543473 DUX4L9Q6RFH8 374 aaPredicted RBP15.51■□□□□ 0.07
SUDS3-204ENST00000543473 ZNF833PQ6ZTB9 187 aa15.51■□□□□ 0.07
SUDS3-204ENST00000543473 NPFFR1Q9GZQ6 430 aa15.51■□□□□ 0.07
SUDS3-204ENST00000543473 SRRM4A7MD48 611 aaKnown RBP15.51■□□□□ 0.07
SUDS3-204ENST00000543473 SRD5A1P18405 259 aa15.51■□□□□ 0.07
SUDS3-204ENST00000543473 SRSF8Q9BRL6 282 aaKnown RBP15.51■□□□□ 0.07
SUDS3-204ENST00000543473 NDPQ00604 133 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 POU2AF1Q16633 256 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 Q8N8P6 123 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 ZC2HC1AQ96GY0 325 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 LINC01587Q99440 93 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 THBDP07204 575 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 NUP37Q8NFH4 326 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 LINC00477Q96M19 166 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 COL4A3Q01955 1670 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 H3BMG7 143 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 SIVA1O15304 175 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 NPYP01303 97 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 AZU1P20160 251 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 C1orf122Q6ZSJ8 110 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 GNLYP22749 145 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 ZNF876PQ49A33 203 aa15.5■□□□□ 0.07
SUDS3-204ENST00000543473 NPC2P61916 151 aa15.49■□□□□ 0.07
SUDS3-204ENST00000543473 C11orf1Q9H5F2 150 aa15.49■□□□□ 0.07
SUDS3-204ENST00000543473 K7ERJ3 54 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms