RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PYYP10082 97 aa7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 ACOT6Q3I5F7 207 aaPredicted RBP7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 TMEM41BQ5BJD5 291 aa7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 SOHLH1Q5JUK2 328 aa7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 OR8I2Q8N0Y5 310 aa7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 GBGT1Q8N5D6 347 aa7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 SPAG8Q99932 426 aaPredicted RBP7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 MRPL32Q9BYC8 188 aaKnown RBP7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 ZNF586Q9NXT0 402 aa7.96□□□□□ -1.14
NPIPB3-210ENST00000542817 TRAV2A0A0B4J234 112 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 TSTD3H0UI37 97 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 H3BTX0 84 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 SLC17A3O00476 420 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 HMGB3O15347 200 aaKnown RBP7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 NDUFB4O95168 129 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 MBP02144 154 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 CD7P09564 240 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 STAG3L2P0CL84 134 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 STAG3L3P0CL85 134 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 RPL7P18124 248 aaKnown RBP7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 RHOBP62745 196 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 ODF3L2Q3SX64 289 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 LCN12Q6JVE5 192 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 DPPA3Q6W0C5 159 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 C20orf173Q96LM9 149 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 PRR25Q96S07 402 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 GPR61Q9BZJ8 451 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 EIF5A2Q9GZV4 153 aaKnown RBP7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 NRN1Q9NPD7 142 aa7.95□□□□□ -1.14
NPIPB3-210ENST00000542817 HELTA6NFD8 242 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 IFITM10A6NMD0 228 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 PRB2P02812 416 aaPredicted RBP7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 BMI1P35226 326 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 CDC34P49427 236 aaPredicted RBP7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 IGFL4Q6B9Z1 124 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 RBPMS2Q6ZRY4 209 aaKnown RBP7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST3H2BBQ8N257 126 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 GPR82Q96P67 336 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 WFDC10AQ9H1F0 79 aa7.94□□□□□ -1.14
NPIPB3-210ENST00000542817 TRBV19A0A075B6N1 114 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 TRAV1-1A0A0B4J248 108 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 PPP1R2P9O14990 202 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 HBE1P02100 147 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 OR10J4P0C629 311 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 HLA-DMBP28068 263 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 DDTP30046 118 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 RPS10P46783 165 aaKnown RBP7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 GALR1P47211 349 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 TFPI2P48307 235 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 PNRC1Q12796 327 aaPredicted RBP7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 PMS2P11Q13670 270 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 ELOBQ15370 118 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 ZNF506Q5JVG8 444 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 MRPL52Q86TS9 123 aaKnown RBP7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 BPIFA4PQ86YQ2 179 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 WFDC3Q8IUB2 231 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 STXBP6Q8NFX7 210 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 MBD3L1Q8WWY6 194 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 ISOC2Q96AB3 205 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 TVP23CQ96ET8 276 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 NEU1Q99519 415 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 ACTR3CQ9C0K3 210 aaPredicted RBP7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 AURKAIP1Q9NWT8 199 aaPredicted RBP7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 TENM3Q9P273 2699 aa7.93□□□□□ -1.14
NPIPB3-210ENST00000542817 CTXND1A0A1B0GTU2 59 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 RBFOX3A6NFN3 312 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 K7EIL1 84 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 SRP19P09132 144 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 ARL14EPLP0DKL9 152 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H1EP10412 219 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 RAB4AP20338 218 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 NDUFA6P56556 154 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 DEFB1P60022 68 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 RPL11P62913 178 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 KHDC3LQ587J8 217 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 COA6Q5JTJ3 125 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 AKR1C8PQ5T2L2 129 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 CTDSP1Q9GZU7 261 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 MAP6D1Q9H9H5 199 aa7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 ZNF331Q9NQX6 463 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-210ENST00000542817 TRBV24-1A0A075B6N3 115 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 GCGP01275 180 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 NBEAP1P0C6P0 100 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 ZNF688P0C7X2 276 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 PRB4P10163 310 aaPredicted RBP7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 S100A7P31151 101 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 FGF8P55075 233 aaPredicted RBP7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 CCL20P78556 96 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 LCN15Q6UWW0 184 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms