RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ODF3Q96PU9 254 aa13.64□□□□□ -0.23
LPCAT3-210ENST00000540090 J3KRW8 73 aa13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 SLC17A3O00476 420 aa13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 SLC38A11Q08AI6 406 aa13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 TMEM14EPQ6UXP3 125 aa13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 TOMM5Q8N4H5 51 aa13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 SAT2Q96F10 170 aaPredicted RBP13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 SLIRPQ9GZT3 109 aaKnown RBP13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 TNFRSF18Q9Y5U5 241 aa13.63□□□□□ -0.23
LPCAT3-210ENST00000540090 TRGV2A0A075B6R0 118 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 LINC00854A0A1B0GVQ3 168 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 H3BTX0 84 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 LEPP41159 167 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 KRTAP10-1P60331 282 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 MCFD2Q8NI22 146 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 RAB2BQ8WUD1 216 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 PXMP4Q9Y6I8 212 aa13.62□□□□□ -0.23
LPCAT3-210ENST00000540090 GOSR2O14653 212 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 SSSCA1O60232 199 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 NXPH4O95158 308 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 METTL15P1P0C7V9 234 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 IGLC2P0DOY2 106 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 C11orf72Q8NBR9 251 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 OR10P1Q8NGE3 313 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 TMEM37Q8WXS4 190 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 MRPS26Q9BYN8 205 aaKnown RBP13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 GSN-AS1Q9NRJ2 163 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 MGAT4CQ9UBM8 478 aa13.61□□□□□ -0.23
LPCAT3-210ENST00000540090 A0A087WTM6 91 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 NPIPB6E9PJ23 425 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 H3BQ15 152 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 AGPAT2O15120 278 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 IFNA5P01569 189 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 MORN5Q5VZ52 161 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 ZNF546Q86UE3 836 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 NFE4Q86UQ8 179 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 DEDD2Q8WXF8 326 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 BCL7BQ9BQE9 202 aa13.6□□□□□ -0.23
LPCAT3-210ENST00000540090 FLG2Q5D862 2391 aaPredicted RBP13.59□□□□□ -0.23
LPCAT3-210ENST00000540090 ZNF324O75467 553 aaPredicted RBP13.59□□□□□ -0.23
LPCAT3-210ENST00000540090 TMBIM6P55061 237 aa13.59□□□□□ -0.23
LPCAT3-210ENST00000540090 UBE2MP61081 183 aaKnown RBP13.59□□□□□ -0.23
LPCAT3-210ENST00000540090 OPCMLQ14982 345 aa13.59□□□□□ -0.23
LPCAT3-210ENST00000540090 ZNF680Q8NEM1 530 aa13.59□□□□□ -0.23
LPCAT3-210ENST00000540090 FUT9Q9Y231 359 aa13.59□□□□□ -0.23
LPCAT3-210ENST00000540090 TRGV1A0A0A0MS02 117 aa13.58□□□□□ -0.24
LPCAT3-210ENST00000540090 C9orf170A2RU37 121 aa13.58□□□□□ -0.24
LPCAT3-210ENST00000540090 COX7A2P2O60397 106 aa13.58□□□□□ -0.24
LPCAT3-210ENST00000540090 SLC25A5P05141 298 aaKnown RBP13.58□□□□□ -0.24
LPCAT3-210ENST00000540090 PYDC2Q56P42 97 aa13.58□□□□□ -0.24
LPCAT3-210ENST00000540090 LINC00467Q9BRT7 94 aa13.58□□□□□ -0.24
LPCAT3-210ENST00000540090 ICOSQ9Y6W8 199 aa13.58□□□□□ -0.24
LPCAT3-210ENST00000540090 PAX4O43316 350 aa13.57□□□□□ -0.24
LPCAT3-210ENST00000540090 SPINK4O60575 86 aa13.57□□□□□ -0.24
LPCAT3-210ENST00000540090 DNAH10OSP0CZ25 163 aa13.57□□□□□ -0.24
LPCAT3-210ENST00000540090 TAS2R30P59541 319 aa13.57□□□□□ -0.24
LPCAT3-210ENST00000540090 ARL16Q0P5N6 197 aa13.57□□□□□ -0.24
LPCAT3-210ENST00000540090 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
LPCAT3-210ENST00000540090 GGACTQ9BVM4 153 aa13.57□□□□□ -0.24
LPCAT3-210ENST00000540090 C7orf71A4D174 169 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 TSC22D2O75157 780 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 ICAM4Q14773 271 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 GUK1Q16774 197 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 C10orf113Q5VZT2 155 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 LYPD5Q6UWN5 251 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 MGST2Q99735 147 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 KLF12Q9Y4X4 402 aa13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 SRRM2Q9UQ35 2752 aaKnown RBP13.56□□□□□ -0.24
LPCAT3-210ENST00000540090 TRAV9-2A0A087WT02 112 aa13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 KLLNB2CW77 178 aa13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 SMR3BP02814 79 aaPredicted RBP13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 EIF4E3Q8N5X7 224 aaKnown RBP13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 ST6GAL2Q96JF0 529 aa13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 DNAJC4Q9NNZ3 241 aa13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 MDFICQ9P1T7 246 aa13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 PRO0255Q9UI72 69 aa13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 V9GYH0 126 aa13.55□□□□□ -0.24
LPCAT3-210ENST00000540090 TCL1AP56279 114 aa13.54□□□□□ -0.24
LPCAT3-210ENST00000540090 SLAQ13239 276 aa13.54□□□□□ -0.24
LPCAT3-210ENST00000540090 MRPL53Q96EL3 112 aaKnown RBP13.54□□□□□ -0.24
LPCAT3-210ENST00000540090 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
LPCAT3-210ENST00000540090 TRAV5A0A0B4J249 113 aa13.53□□□□□ -0.24
LPCAT3-210ENST00000540090 ZNF253O75346 499 aa13.53□□□□□ -0.24
LPCAT3-210ENST00000540090 OR4E1P0C645 316 aa13.53□□□□□ -0.24
LPCAT3-210ENST00000540090 GCSHP23434 173 aa13.53□□□□□ -0.24
LPCAT3-210ENST00000540090 CD300CQ08708 224 aa13.53□□□□□ -0.24
LPCAT3-210ENST00000540090 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
LPCAT3-210ENST00000540090 HHLA3Q9XRX5 114 aa13.53□□□□□ -0.24
LPCAT3-210ENST00000540090 DNAH8Q96JB1 4490 aa13.52□□□□□ -0.24
LPCAT3-210ENST00000540090 FAM229AH3BQW9 127 aa13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 K7EP13 123 aa13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 IGHV3-53P01767 116 aa13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 CRYBA4P53673 196 aa13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 ERCC8Q13216 396 aa13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 BTN1A1Q13410 526 aa13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 MRPL23Q16540 153 aaKnown RBP13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 IBA57Q5T440 356 aaKnown RBP13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 Q6ZRG5 221 aa13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 RCL1Q9Y2P8 373 aaKnown RBP13.52□□□□□ -0.25
LPCAT3-210ENST00000540090 LY96Q9Y6Y9 160 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms