RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 M0QZ24 198 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 VAMP3Q15836 100 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 C10orf113Q5VZT2 155 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 TMUB1Q9BVT8 246 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 ITPR3Q14573 2671 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 UNC79Q9P2D8 2635 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 IGLV11-55A0A075B6I3 123 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 TRAV9-2A0A087WT02 112 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 HSBP1O75506 76 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 ECSCRQ19T08 205 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 ERASQ7Z444 233 aa13.36□□□□□ -0.27
PCDHB17P-201ENST00000539533 KLF5Q13887 457 aaPredicted RBP13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 Q56UQ5 140 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 PATE2Q6UY27 113 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 OR1L4Q8NGR5 311 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 TRGV9Q99603 122 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 FAM181BA6NEQ2 426 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 PRR27Q6MZM9 219 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 CIARTQ8N365 385 aaPredicted RBP13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 OR4F17Q8NGA8 305 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 RNF24Q9Y225 148 aa13.35□□□□□ -0.27
PCDHB17P-201ENST00000539533 TRAV30A0A087WSZ9 112 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 A6NDX4 124 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 G3V318 75 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 IGLC1P0CG04 106 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 IGLL1P15814 213 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 DEFB112Q30KQ8 113 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 FXYD5Q96DB9 178 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 CBY3A6NI87 242 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 M0R2Z0 102 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 OR2J3O76001 311 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 BPIFB3P59826 476 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 EBLN2Q6P2I7 272 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 CHRDL1Q9BU40 450 aa13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 SSBP4Q9BWG4 385 aaPredicted RBP13.34□□□□□ -0.27
PCDHB17P-201ENST00000539533 MXRA5Q9NR99 2828 aa13.33□□□□□ -0.27
PCDHB17P-201ENST00000539533 HIGD1CA8MV81 97 aa13.33□□□□□ -0.28
PCDHB17P-201ENST00000539533 PPBPP02775 128 aa13.33□□□□□ -0.28
PCDHB17P-201ENST00000539533 HIST1H1EP10412 219 aaKnown RBP13.33□□□□□ -0.28
PCDHB17P-201ENST00000539533 RNASEKQ6P5S7 137 aaKnown RBP13.33□□□□□ -0.28
PCDHB17P-201ENST00000539533 VPS25Q9BRG1 176 aa13.33□□□□□ -0.28
PCDHB17P-201ENST00000539533 ORM2P19652 201 aa13.32□□□□□ -0.28
PCDHB17P-201ENST00000539533 GNG5P63218 68 aa13.32□□□□□ -0.28
PCDHB17P-201ENST00000539533 IGKV1-17P01599 117 aa13.32□□□□□ -0.28
PCDHB17P-201ENST00000539533 CAMPP49913 170 aa13.32□□□□□ -0.28
PCDHB17P-201ENST00000539533 LINC00527Q9UJ94 153 aa13.32□□□□□ -0.28
PCDHB17P-201ENST00000539533 PSG1P11464 419 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 UBE2G1P62253 170 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 ATP5L2Q7Z4Y8 100 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 FAM110DQ8TAY7 271 aaPredicted RBP13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 HECTD1Q9ULT8 2610 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 IGHV3-23P01764 117 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 MYCNOSP40205 109 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 OR1B1Q8NGR6 318 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 TP73-AS1Q9UF72 201 aa13.31□□□□□ -0.28
PCDHB17P-201ENST00000539533 A0A1B0GXF2 115 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 FSHBP01225 129 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 IGHV4-59P01825 116 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 BLCAPP62952 87 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 SMIM15Q7Z3B0 74 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 LINC00305Q7Z4B0 112 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 EPDR1Q9UM22 224 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 FASNP49327 2511 aaKnown RBP13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 F8W735 103 aaPredicted RBP13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 THYN1Q9P016 225 aa13.3□□□□□ -0.28
PCDHB17P-201ENST00000539533 Q6ZS46 218 aa13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 CST9LQ9H4G1 147 aa13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 FLNAP21333 2647 aaKnown RBP13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 SLC25A5P05141 298 aaKnown RBP13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 MFAP4P55083 255 aa13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 SPATA12Q7Z6I5 190 aa13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 C21orf62Q9NYP8 219 aa13.29□□□□□ -0.28
PCDHB17P-201ENST00000539533 GNG7O60262 68 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 RHOGP84095 191 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 BLNKQ8WV28 456 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 URB1-AS1Q96HZ7 61 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 KLF12Q9Y4X4 402 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 TLN2Q9Y4G6 2542 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 OCIAD2Q56VL3 154 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 PRR31Q5SQ13 230 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 STXBP6Q8NFX7 210 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 SMIM12Q96EX1 92 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 GPR82Q96P67 336 aa13.28□□□□□ -0.28
PCDHB17P-201ENST00000539533 TRAV41A0A0B4J266 112 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 PGPA6NDG6 321 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 TAX1BP3O14907 124 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 LYZP61626 148 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 HBBP68871 147 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 RPP21Q9H633 154 aaKnown RBP13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 CLEC5AQ9NY25 188 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 PLP1P60201 277 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 C15orf32Q32M92 178 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 TMEM70Q9BUB7 260 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 MLST8Q9BVC4 326 aa13.27□□□□□ -0.29
PCDHB17P-201ENST00000539533 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms