RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 RHOBP62745 196 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 SERF2P84101 59 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 RNF182Q8N6D2 247 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 OR10G4Q8NGN3 311 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 OR10G9Q8NGN4 311 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 OR10G7Q8NGN6 311 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 ZNF471Q9BX82 626 aaPredicted RBP8.9□□□□□ -0.98
CHD4-203ENST00000535717 ZNF586Q9NXT0 402 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 AGRNO00468 2067 aa8.89□□□□□ -0.99
CHD4-203ENST00000535717 SLC17A3O00476 420 aa8.89□□□□□ -0.99
CHD4-203ENST00000535717 HLA-DMBP28068 263 aa8.89□□□□□ -0.99
CHD4-203ENST00000535717 EIF5AP63241 154 aaKnown RBP8.89□□□□□ -0.99
CHD4-203ENST00000535717 GUK1Q16774 197 aa8.89□□□□□ -0.99
CHD4-203ENST00000535717 ACTL10Q5JWF8 245 aa8.89□□□□□ -0.99
CHD4-203ENST00000535717 LCN15Q6UWW0 184 aa8.89□□□□□ -0.99
CHD4-203ENST00000535717 RPP25LQ8N5L8 163 aaKnown RBP8.89□□□□□ -0.99
CHD4-203ENST00000535717 SAT2Q96F10 170 aaPredicted RBP8.89□□□□□ -0.99
CHD4-203ENST00000535717 ZNF331Q9NQX6 463 aaPredicted RBP8.89□□□□□ -0.99
CHD4-203ENST00000535717 STAB2Q8WWQ8 2551 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 HUWE1Q7Z6Z7 4374 aaKnown RBP8.88□□□□□ -0.99
CHD4-203ENST00000535717 TRBV19A0A075B6N1 114 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 A0A1W2PPV4 95 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 MBP02144 154 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 NHLRC4P0CG21 123 aaPredicted RBP8.88□□□□□ -0.99
CHD4-203ENST00000535717 HIST1H1EP10412 219 aaKnown RBP8.88□□□□□ -0.99
CHD4-203ENST00000535717 SPP1P10451 314 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 ADCYAP1P18509 176 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 GDF5OSQ5U4N7 250 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
CHD4-203ENST00000535717 STHQ8IWL8 128 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 FXYD5Q96DB9 178 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 ZNF503Q96F45 646 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 PAXXQ9BUH6 204 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 RPRMQ9NS64 109 aa8.88□□□□□ -0.99
CHD4-203ENST00000535717 F6UB75 175 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 H3BMM0 161 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 OR7C2O60412 319 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 NDUFB4O95168 129 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 OR10J4P0C629 311 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 TPT1P13693 172 aaKnown RBP8.87□□□□□ -0.99
CHD4-203ENST00000535717 HLA-DRB4P13762 266 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 APOC4P55056 127 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 PSG3Q16557 428 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 KHDC3LQ587J8 217 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 FOXI2Q6ZQN5 318 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 BLNKQ8WV28 456 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 RNF141Q8WVD5 230 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 TM2D3Q9BRN9 247 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 SLC50A1Q9BRV3 221 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 HLA-DRB4X5D2U9 266 aa8.87□□□□□ -0.99
CHD4-203ENST00000535717 KIR2DL5BA0A0G2JN68 375 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 KIR2DL5BA0A0G2JPC4 375 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 A0A0J9YX75 114 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
CHD4-203ENST00000535717 ZNF253O75346 499 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 NBEAP1P0C6P0 100 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 CDC34P49427 236 aaPredicted RBP8.86□□□□□ -0.99
CHD4-203ENST00000535717 TAS2R45P59539 299 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 RAB4BP61018 213 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 LBHQ53QV2 105 aaPredicted RBP8.86□□□□□ -0.99
CHD4-203ENST00000535717 BAP18Q8IXM2 172 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 KIR2DL5AQ8N109 375 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 ZNF738Q8NE65 137 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 RAB24Q969Q5 203 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 SMCO4Q9NRQ5 59 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
CHD4-203ENST00000535717 ZNF705FA8MVS1 300 aaPredicted RBP8.85□□□□□ -0.99
CHD4-203ENST00000535717 C1orf196B1AJZ1 125 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 ZNF705DP0CH99 300 aaPredicted RBP8.85□□□□□ -0.99
CHD4-203ENST00000535717 ZNF705BP0CI00 300 aaPredicted RBP8.85□□□□□ -0.99
CHD4-203ENST00000535717 PRB4P10163 310 aaPredicted RBP8.85□□□□□ -0.99
CHD4-203ENST00000535717 UBE2L3P68036 154 aaKnown RBP8.85□□□□□ -0.99
CHD4-203ENST00000535717 PDE6HQ13956 83 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 PEA15Q15121 130 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 ZNF726P1Q15940 193 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 AKR1C8PQ5T2L2 129 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 EBLN2Q6P2I7 272 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 SSX7Q7RTT5 188 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 RXFP4Q8TDU9 374 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 RPUSD4Q96CM3 377 aaKnown RBP8.85□□□□□ -0.99
CHD4-203ENST00000535717 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 ACTR3CQ9C0K3 210 aaPredicted RBP8.85□□□□□ -0.99
CHD4-203ENST00000535717 TMPRSS5Q9H3S3 457 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 RETNQ9HD89 108 aa8.85□□□□□ -0.99
CHD4-203ENST00000535717 COLCA2A8K830 154 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 IGKV3-20P01619 116 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 GIG44P09565 113 aaPredicted RBP8.84□□□□□ -0.99
CHD4-203ENST00000535717 SEC11BP0C7V7 166 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 STAG3L2P0CL84 134 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 STAG3L3P0CL85 134 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 ARL14EPLP0DKL9 152 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 PSG9Q00887 426 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 EIF5AL1Q6IS14 154 aaKnown RBP8.84□□□□□ -0.99
CHD4-203ENST00000535717 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 EXOC3-AS1Q8N2X6 119 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 CLUHP3Q96NS8 147 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms