RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 GOLT1AQ6ZVE7 132 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 CEND1Q8N111 149 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 MAPK1IP1LQ8NDC0 245 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 OSR1Q8TAX0 266 aaPredicted RBP5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 FMC1Q96HJ9 113 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 LINC00479Q96M42 142 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 MED12LQ86YW9 2145 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 IGHV3OR15-7A0A075B7D8 119 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 TRAV2A0A0B4J234 112 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 LEPP41159 167 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 FXYD2P54710 66 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 MFAP4P55083 255 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 LYZP61626 148 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 RRN3P1Q2M238 152 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 C2orf83Q53S99 150 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 MBNL2Q5VZF2 373 aaKnown RBP5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 ODF3L1Q8IXM7 274 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 GCSAMQ8N6F7 178 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 NEU4Q8WWR8 484 aaPredicted RBP5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 BEX4Q9NWD9 120 aaPredicted RBP5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF106Q9H2Y7 1883 aaKnown RBP5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 IGKV1-6A0A0C4DH72 117 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 TCRBV4S1A1TA0A5B7 111 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 E9PLN8 166 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 ORM1P02763 201 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 TFF1P04155 84 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 IGFL3Q6UXB1 125 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 LCNL1Q6ZST4 164 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 VKORC1Q9BQB6 163 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 H3BTX0 84 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 NDUFA3O95167 84 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 PYYP10082 97 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 FXYD7P58549 80 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 LINC01559Q495D7 138 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 OR1L8Q8NGR8 309 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 LRP4O75096 1905 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 SYNGR3O43761 229 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 IFI27P40305 119 aaPredicted RBP5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF146Q15072 292 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 TAL2Q16559 108 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 POU2AF1Q16633 256 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 MOGAT3Q86VF5 341 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 FAM168AQ92567 244 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 RAB1BQ9H0U4 201 aa5.51□□□□□ -1.53
TGFBR3-209ENST00000532540 FABP5P3A8MUU1 101 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 C12orf77C9JDV5 145 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 J3QKU1 62 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 CD40P25942 277 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 IGF2-ASQ6U949 168 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 ACP7Q6ZNF0 438 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 PRDM14Q9GZV8 571 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 PRORYQ9H606 182 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 IGLV3-32A0A0A0MS00 114 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 TRAV24A0A0B4J272 114 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 D6R8Y8 96 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 LINC00305Q7Z4B0 112 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 ATP6V0E2Q8NHE4 81 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 GTSF1Q8WW33 167 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 TMEM54Q969K7 222 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 RASL11BQ9BPW5 248 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 GGTLC3B5MD39 225 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 C9JAW5 83 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 ID1P41134 155 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 ASIPP42127 132 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 TNFAIP6P98066 277 aaPredicted RBP5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 TEN1Q86WV5 123 aa5.5□□□□□ -1.53
TGFBR3-209ENST00000532540 LINC01549A6NIU2 74 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 CEACAM4O75871 244 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 IGHG3P01860 377 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 RBP4P02753 201 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 CRYGCP07315 174 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 GLMPQ8WWB7 406 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 NPIPB3Q92617 1050 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 TIMD4Q96H15 378 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 TMEM101Q96IK0 257 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 IFI27L2Q9H2X8 130 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 NXT2Q9NPJ8 142 aaKnown RBP5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 DKK4Q9UBT3 224 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 KMT2BQ9UMN6 2715 aaPredicted RBP5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF503-AS2A6NEH8 195 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 B9A039 149 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 CT83Q5H943 113 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 SLC25A53Q5H9E4 307 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 TMEM42Q69YG0 159 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 OR4C13Q8NGP0 309 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 HIGD1AQ9Y241 93 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 FN1P02751 2386 aaKnown RBP5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 TRBV6-6A0A0A6YYG2 114 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 ZNF815PA8K554 130 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 CRXO43186 299 aaPredicted RBP5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 MPV17P39210 176 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 ATP5J2P56134 94 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 NDUFV3P56181 108 aaKnown RBP5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 CDSNQ15517 529 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 Q71RC1 249 aaPredicted RBP5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 C15orf53Q8NAA6 179 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 GFRA4Q9GZZ7 299 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 KLK15Q9H2R5 256 aa5.49□□□□□ -1.53
TGFBR3-209ENST00000532540 CFHR2P36980 270 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms