RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 MPDU1O75352 247 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 CST7O76096 145 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 IGLC2P0DOY2 106 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 HTN3P15516 51 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 RHOBP62745 196 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 HBG1P69891 147 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 HBG2P69892 147 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 HIST1H1AQ02539 215 aaPredicted RBP7.42□□□□□ -1.22
CPSF1-203ENST00000527916 RAB32Q13637 225 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 SPATA12Q7Z6I5 190 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 RPUSD4Q96CM3 377 aaKnown RBP7.42□□□□□ -1.22
CPSF1-203ENST00000527916 SAT2Q96F10 170 aaPredicted RBP7.42□□□□□ -1.22
CPSF1-203ENST00000527916 PFDN5Q99471 154 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 C20orf144Q9BQM9 153 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 GPN1Q9HCN4 374 aaPredicted RBP7.42□□□□□ -1.22
CPSF1-203ENST00000527916 PPP1R14DQ9NXH3 145 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 PXMP4Q9Y6I8 212 aa7.42□□□□□ -1.22
CPSF1-203ENST00000527916 NBDYA0A0U1RRE5 68 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 A6NHS1 94 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 ZNF705GA8MUZ8 300 aaPredicted RBP7.41□□□□□ -1.22
CPSF1-203ENST00000527916 ZNF253O75346 499 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 UPK1BO75841 260 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 CDKN1BP46527 198 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 TAS2R60P59551 318 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 DAD1P61803 113 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 OPCMLQ14982 345 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 MORN5Q5VZ52 161 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 MIC13Q5XKP0 118 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 STX12Q86Y82 276 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 BAP18Q8IXM2 172 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 C15orf53Q8NAA6 179 aa7.41□□□□□ -1.22
CPSF1-203ENST00000527916 TRAV12-2A0A075B6T6 113 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 IGSF23A1L1A6 192 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 PLAC8L1A1L4L8 177 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 PRAF2O60831 178 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 RLN2P04090 185 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 S100A10P60903 97 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 CYCSP99999 105 aaKnown RBP7.4□□□□□ -1.22
CPSF1-203ENST00000527916 ZNF493Q6ZR52 646 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 LINC01587Q99440 93 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 NMES1Q9C002 83 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 SLC39A9Q9NUM3 307 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 MYCBP2O75592 4640 aa7.4□□□□□ -1.22
CPSF1-203ENST00000527916 FLG2Q5D862 2391 aaPredicted RBP7.39□□□□□ -1.23
CPSF1-203ENST00000527916 H3BQ15 152 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 PRM2P04554 102 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 AZU1P20160 251 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 TMEM88Q6PEY1 159 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 OR10J6PQ8NGY7 276 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 ENKURQ8TC29 256 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 MRPL53Q96EL3 112 aaKnown RBP7.39□□□□□ -1.23
CPSF1-203ENST00000527916 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 ODF3Q96PU9 254 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 SLC25A31Q9H0C2 315 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 TMEM14CQ9P0S9 112 aa7.39□□□□□ -1.23
CPSF1-203ENST00000527916 TRAV5A0A0B4J249 113 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 UBE2L5PA0A1B0GUS4 154 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 CBY3A6NI87 242 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 E5RGE8 158 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 H7BYZ3 331 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 SLC17A3O00476 420 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 FGF7P21781 194 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 IFITM3Q01628 133 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 BAXQ07812 192 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 MARVELD1Q9BSK0 173 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 PTTG2Q9NZH5 202 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 PRELID1Q9Y255 219 aa7.38□□□□□ -1.23
CPSF1-203ENST00000527916 TIMM8BQ9Y5J9 83 aaPredicted RBP7.38□□□□□ -1.23
CPSF1-203ENST00000527916 VPS13BQ7Z7G8 4022 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 TRBV19A0A075B6N1 114 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 PRAC2D3DTV9 90 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 NPIPB6E9PJ23 425 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 INMT-MINDY4F8WBC2 141 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 SNRPCP09234 159 aaKnown RBP7.37□□□□□ -1.23
CPSF1-203ENST00000527916 HIST1H1EP10412 219 aaKnown RBP7.37□□□□□ -1.23
CPSF1-203ENST00000527916 NHLH2Q02577 135 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 PDE6HQ13956 83 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 RNASE8Q8TDE3 154 aaKnown RBP7.37□□□□□ -1.23
CPSF1-203ENST00000527916 TMEM263Q8WUH6 116 aaKnown RBP7.37□□□□□ -1.23
CPSF1-203ENST00000527916 NPCDR1Q9BY65 106 aa7.37□□□□□ -1.23
CPSF1-203ENST00000527916 H3BTX0 84 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 ATP5G1P05496 136 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 DEFB130BP0DP73 79 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 DEFB130AP0DP74 79 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 LEPP41159 167 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 ATP5G3P48201 142 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 CCL18P55774 89 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 CCDC28AQ8IWP9 274 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 OR5C1Q8NGR4 320 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 ZNRF2Q8NHG8 242 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 LINC00477Q96M19 166 aa7.36□□□□□ -1.23
CPSF1-203ENST00000527916 H0YIZ8 118 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 NDUFB4O95168 129 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 SIX6O95475 246 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 HTN1P15515 57 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 KIR3DS1Q14943 382 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 FCN2Q15485 313 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms