RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SMIM9A6NGZ8 99 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 HMSDA8MTL9 139 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 SMLR1H3BR10 107 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 HBE1P02100 147 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF705DP0CH99 300 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF705BP0CI00 300 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 HLA-DMBP28068 263 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 ICAM4Q14773 271 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 SPINK13Q1W4C9 94 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 TMEM78Q5T7P6 136 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 LYPD1Q8N2G4 141 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 TMEM256Q8N2U0 113 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 KCNRGQ8N5I3 272 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 STOML3Q8TAV4 291 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 C11orf45Q8TAV5 145 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 RXFP4Q8TDU9 374 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 SAT2Q96F10 170 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 FAM167A-AS1Q96KT0 104 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 IGF2BP2-AS1Q96M15 143 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF471Q9BX82 626 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 SH3BGRL3Q9H299 93 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 TMEM167BQ9NRX6 74 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 RFNGQ9Y644 331 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 IGHV4-28A0A0C4DH34 117 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 NUPR2A6NF83 97 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 A8MTW9 85 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF705FA8MVS1 300 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF705EA8MWA4 302 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 NPIPB6E9PJ23 425 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 G3V3Q6 166 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 K7EQM0 130 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 M0R2Z0 102 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 HMGB3O15347 200 aaKnown RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 BCL2L11O43521 198 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 CXorf1O96002 111 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 GIG44P09565 113 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 ARL14EPLP0DKL9 152 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 TPT1P13693 172 aaKnown RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 CDKN1BP46527 198 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 RANP62826 216 aaKnown RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 PMS2P11Q13670 270 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 RRN3P1Q2M238 152 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZFAND6Q6FIF0 208 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 EIF5AL1Q6IS14 154 aaKnown RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 AMTNQ6UX39 209 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 Q6ZNX1 250 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 TCTE3Q8IZS6 198 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 EXOC3-AS1Q8N2X6 119 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 RAB24Q969Q5 203 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 FXYD5Q96DB9 178 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 PHYHIPLQ96FC7 376 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 HYLS1Q96M11 299 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 LINC00477Q96M19 166 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 ODF3Q96PU9 254 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 NEU1Q99519 415 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 C20orf144Q9BQM9 153 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 Q9H3A6 140 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 OTORQ9NRC9 128 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 RPH3ALQ9UNE2 315 aa3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 KLK5Q9Y337 293 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P40-201ENST00000525121 IGKV2-40A0A087WW87 121 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 CTXND1A0A1B0GTU2 59 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 LOC102723971A0A1B0GUV8 181 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 SERTM2A0A1B0GWG4 89 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 RBAKDNA6NC62 111 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 UMAD1C9J7I0 102 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 PRAC2D3DTV9 90 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 H7BYZ3 331 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 M0R3E3 92 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 DEFB4AO15263 64 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 NDUFB4O95168 129 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 IGKV2D-40P01614 121 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 SLC25A5P05141 298 aaKnown RBP3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 STAG3L2P0CL84 134 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 STAG3L3P0CL85 134 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 SPART-AS1P0CW21 52 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 GCHFRP30047 84 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 EMP1P54849 157 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZFP69Q49AA0 526 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 CASC10Q5T4H9 136 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF705AQ6ZN79 300 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 TMUB2Q71RG4 321 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 CCDC28AQ8IWP9 274 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 BAP18Q8IXM2 172 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 RPP25LQ8N5L8 163 aaKnown RBP3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 Q8NAQ8 132 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 CSNK1G2-AS1Q8NCQ2 148 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 LINC01587Q99440 93 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 NIPSNAP3BQ9BS92 247 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 NDFIP1Q9BT67 221 aa3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 PRKDCP78527 4128 aaKnown RBP3.92□□□□□ -1.78
HMGB1P40-201ENST00000525121 TRAV12-2A0A075B6T6 113 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 MAP1LC3B2A6NCE7 125 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 PGPA6NDG6 321 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 C11orf94C9JXX5 98 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 TEX46H3BTG2 121 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 J3KRW8 73 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 EIF3GO75821 320 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 IFNA7P01567 189 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 C1QBP02746 253 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms