RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 IGHV4-61A0A0C4DH41 118 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 OR4C46A6NHA9 309 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 B9A039 149 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 HLA-DRB1P01911 266 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 HTR1DP28221 377 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 CSN1S1P47710 185 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 LYZP61626 148 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 SSBP2P81877 361 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 C12orf54Q6X4T0 127 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 PPP1R27Q86WC6 154 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 BPIFA4PQ86YQ2 179 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 GATD1Q8NB37 220 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 RPEQ96AT9 228 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 LINC00479Q96M42 142 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 SIGLEC9Q9Y336 463 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 RNF114Q9Y508 228 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 INSIG2Q9Y5U4 225 aa6.84□□□□□ -1.31
CTNNA1-223ENST00000520520 DYSFO75923 2080 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 IGHV1-24A0A0C4DH33 117 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 A0A1B0GUT8 65 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 C2orf70A6NJV1 201 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 SYS1-DBNDD2H3BUS1 97 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 TNFRSF13BO14836 293 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 TOX4O94842 621 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 CRYGBP07316 175 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 NPSP0C0P6 89 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 APOBEC3AP31941 199 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 CEACAM3P40198 252 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 PTTG1IPP53801 180 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 RPS20P60866 119 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 PDE6HQ13956 83 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 GDF5OSQ5U4N7 250 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 LEMD1Q68G75 181 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 HCP5Q6MZN7 132 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 SLC25A34Q6PIV7 304 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 TCF24Q7RTU0 167 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 ARL6IP6Q8N6S5 226 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 PGLYRP4Q96LB8 373 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 SLC25A39Q9BZJ4 359 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 BPESC1Q9GZL8 116 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 AAMDCQ9H7C9 122 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 TMEM160Q9NX00 188 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 DCAF16Q9NXF7 216 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 COX11Q9Y6N1 276 aa6.83□□□□□ -1.32
CTNNA1-223ENST00000520520 IGHV1-3A0A0C4DH29 117 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 H3BRN7 92 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 TCF21O43680 179 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 IGLC1P0CG04 106 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 PSMG4Q5JS54 123 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 EBLN2Q6P2I7 272 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 GOLT1AQ6ZVE7 132 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 PRNTQ86SH4 94 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 OR10AG1Q8NH19 301 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 SRSF12Q8WXF0 261 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 SSBP4Q9BWG4 385 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 TPSG1Q9NRR2 321 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 CTSZQ9UBR2 303 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 MALRD1Q5VYJ5 2156 aa6.82□□□□□ -1.32
CTNNA1-223ENST00000520520 TEX22C9J3V5 150 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 E7EUB6 86 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 BUB1B-PAK6H3BSN5 160 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 CNIH1O95406 144 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 IGLV1-47P01700 117 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 PSG1P11464 419 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 IGLL1P15814 213 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 GPR6P46095 362 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 HINT1P49773 126 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 FOXA3P55318 350 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 PSG9Q00887 426 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 HIST1H1AQ02539 215 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 UBE2V1Q13404 147 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 LCN12Q6JVE5 192 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 LYPD2Q6UXB3 125 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 ZNF841Q6ZN19 808 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 ATOH7Q8N100 152 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 STPG4Q8N801 248 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 DPF1Q92782 380 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 ZNF48Q96MX3 618 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 HEATR1Q9H583 2144 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 MRPL36Q9P0J6 103 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-223ENST00000520520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.81□□□□□ -1.329e-8■■■■□ 24.7
CTNNA1-223ENST00000520520 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 VWC2LB2RUY7 222 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 LYNX1G3V0Z9 82 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 I3L2K1 104 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 GHRHP01286 108 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 IGHV3-48P01763 117 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 LYNX1P0DP58 116 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 TFPI2P48307 235 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 PSG3Q16557 428 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 OR4C5Q8NGB2 326 aa6.8□□□□□ -1.32
CTNNA1-223ENST00000520520 TIMD4Q96H15 378 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms