RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 DUSP14O95147 198 aaKnown RBP8.66□□□□□ -1.02
HPS4-218ENST00000519774 NDUFB4O95168 129 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 MBP02144 154 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 GIG44P09565 113 aaPredicted RBP8.66□□□□□ -1.02
HPS4-218ENST00000519774 NBEAP1P0C6P0 100 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 CNN1P51911 297 aaKnown RBP8.66□□□□□ -1.02
HPS4-218ENST00000519774 SERF2P84101 59 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 PDE6HQ13956 83 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 TMEM41BQ5BJD5 291 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 OR8A1Q8NGG7 326 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 FXYD5Q96DB9 178 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 ZNF503Q96F45 646 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 ZNF471Q9BX82 626 aaPredicted RBP8.66□□□□□ -1.02
HPS4-218ENST00000519774 SLC35B3Q9H1N7 401 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 XCL2Q9UBD3 114 aa8.66□□□□□ -1.02
HPS4-218ENST00000519774 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 PSG9Q00887 426 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 CD300CQ08708 224 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 AKR1C8PQ5T2L2 129 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 TMUB2Q71RG4 321 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 EXOC3-AS1Q8N2X6 119 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 RPP25LQ8N5L8 163 aaKnown RBP8.65□□□□□ -1.02
HPS4-218ENST00000519774 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 AAMDCQ9H7C9 122 aa8.65□□□□□ -1.02
HPS4-218ENST00000519774 DNAH9Q9NYC9 4486 aa8.65□□□□□ -1.03
HPS4-218ENST00000519774 M0R3E3 92 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 C1QBP02746 253 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 ICAM4Q14773 271 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 PQLC2Q6ZP29 291 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 RAB24Q969Q5 203 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 CLUHP3Q96NS8 147 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 RARRES2Q99969 163 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 ACTR3CQ9C0K3 210 aaPredicted RBP8.64□□□□□ -1.03
HPS4-218ENST00000519774 PPP1R14DQ9NXH3 145 aa8.64□□□□□ -1.03
HPS4-218ENST00000519774 A8MTW9 85 aa8.63□□□□□ -1.03
HPS4-218ENST00000519774 RANP62826 216 aaKnown RBP8.63□□□□□ -1.03
HPS4-218ENST00000519774 SPINK13Q1W4C9 94 aa8.63□□□□□ -1.03
HPS4-218ENST00000519774 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
HPS4-218ENST00000519774 SSX7Q7RTT5 188 aa8.63□□□□□ -1.03
HPS4-218ENST00000519774 IQCF2Q8IXL9 164 aa8.63□□□□□ -1.03
HPS4-218ENST00000519774 OR10J6PQ8NGY7 276 aa8.63□□□□□ -1.03
HPS4-218ENST00000519774 PRELID1Q9Y255 219 aa8.63□□□□□ -1.03
HPS4-218ENST00000519774 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 BOLA2-SMG1P6H3BVE0 249 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 M0R2Z0 102 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 STAG3L2P0CL84 134 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 STAG3L3P0CL85 134 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 LORP23490 312 aaPredicted RBP8.62□□□□□ -1.03
HPS4-218ENST00000519774 EIF5AP63241 154 aaKnown RBP8.62□□□□□ -1.03
HPS4-218ENST00000519774 LGALSLQ3ZCW2 172 aaPredicted RBP8.62□□□□□ -1.03
HPS4-218ENST00000519774 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 MRPL53Q96EL3 112 aaKnown RBP8.62□□□□□ -1.03
HPS4-218ENST00000519774 HYLS1Q96M11 299 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 Q9H3A6 140 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 EDA2RQ9HAV5 297 aa8.62□□□□□ -1.03
HPS4-218ENST00000519774 IGKV2-40A0A087WW87 121 aaPredicted RBP8.61□□□□□ -1.03
HPS4-218ENST00000519774 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
HPS4-218ENST00000519774 INSP01308 110 aa8.61□□□□□ -1.03
HPS4-218ENST00000519774 IGKV2D-40P01614 121 aaPredicted RBP8.61□□□□□ -1.03
HPS4-218ENST00000519774 TPT1P13693 172 aaKnown RBP8.61□□□□□ -1.03
HPS4-218ENST00000519774 GCHFRP30047 84 aa8.61□□□□□ -1.03
HPS4-218ENST00000519774 ZNF726P1Q15940 193 aa8.61□□□□□ -1.03
HPS4-218ENST00000519774 ZFP69Q49AA0 526 aa8.61□□□□□ -1.03
HPS4-218ENST00000519774 BAP18Q8IXM2 172 aa8.61□□□□□ -1.03
HPS4-218ENST00000519774 RPH3ALQ9UNE2 315 aa8.61□□□□□ -1.03
HPS4-218ENST00000519774 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 NPIPB6E9PJ23 425 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 DEFB4AO15263 64 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 CXorf1O96002 111 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 AMBPP02760 352 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 SEC11BP0C7V7 166 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 CSN1S1P47710 185 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 ERCC8Q13216 396 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 X6R8D5 127 aa8.6□□□□□ -1.03
HPS4-218ENST00000519774 IGHV4-28A0A0C4DH34 117 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 PGPA6NDG6 321 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 ZNF705EA8MWA4 302 aaPredicted RBP8.59□□□□□ -1.03
HPS4-218ENST00000519774 J3KRW8 73 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 CT45A10P0DMU9 189 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 FGF8P55075 233 aaPredicted RBP8.59□□□□□ -1.03
HPS4-218ENST00000519774 FAM74A1Q5RGS3 127 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 FAM213BQ8TBF2 198 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 TMED6Q8WW62 240 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 IGF2BP2-AS1Q96M15 143 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 TMEM208Q9BTX3 173 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
HPS4-218ENST00000519774 HUWE1Q7Z6Z7 4374 aaKnown RBP8.59□□□□□ -1.03
HPS4-218ENST00000519774 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms