RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 QRFPP83859 136 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 TAL2Q16559 108 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 Q8TCH9 128 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 TOMM40O96008 361 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 CR1LQ2VPA4 569 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 LGALS9BQ3B8N2 356 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 PRR31Q5SQ13 230 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 LGALS9CQ6DKI2 356 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 TMEM86BQ8N661 226 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
PCDHGA6-201ENST00000517434 GATA4P43694 442 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 TMEM42Q69YG0 159 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 COL4A6Q14031 1691 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 TRBV6-6A0A0A6YYG2 114 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 H3BMG7 143 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 CRPP02741 224 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 CFPP27918 469 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 VOPP1Q96AW1 172 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 LIME1Q9H400 295 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 RNASE4P34096 147 aaKnown RBP9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 GAFA1Q96PS6 74 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 S4R3C0 116 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 COL8A2P25067 703 aa9.94□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGKV3D-20A0A0C4DH25 116 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 BUB1B-PAK6H3BSN5 160 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 PCNX2A6NKB5 2137 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 UTF1Q5T230 341 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 MPDZO75970 2070 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGHV3-66A0A0C4DH42 116 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 NTF4P34130 210 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGFL2Q6UWQ7 119 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 UBE2DNLQ8IWF7 75 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 GATD1Q8NB37 220 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 BDP1A6H8Y1 2624 aa9.93□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGHV1-69DA0A0B4J2H0 117 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 IGHV1-69P01742 117 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 CFAP161Q6P656 301 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 BRD3OSQ6XYD6 125 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 TEX48A0A1B0GUV7 120 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 Q6ZVH6 145 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 KLHL30-AS1Q8NEE0 82 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 PHLDA1Q8WV24 401 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 C11orf44Q8N8P7 122 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 WFDC12Q8WWY7 111 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 C15orf62A8K5M9 175 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 DOCK11Q5JSL3 2073 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 TICRRQ7Z2Z1 1910 aa9.92□□□□□ -0.82
PCDHGA6-201ENST00000517434 FNDC10F2Z333 226 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 CD7P09564 240 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 SAA4P35542 130 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 Q6ZS49 121 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 ZNF492Q9P255 531 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 VWC2LB2RUY7 222 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 C15orf32Q32M92 178 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 OR11H6Q8NGC7 330 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 FREM3P0C091 2139 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 CD24P25063 80 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 CD177Q8N6Q3 437 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 EXOC3-AS1Q8N2X6 119 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 C15orf53Q8NAA6 179 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 DKK4Q9UBT3 224 aa9.91□□□□□ -0.82
PCDHGA6-201ENST00000517434 VCYO14598 125 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 C9orf139Q6ZV77 190 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 TRGV4A0A0C4DH28 118 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 PMS2P5A8MQ11 134 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 TMEM219Q86XT9 240 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 A0A0G2JRQ6 117 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 LYPD1Q8N2G4 141 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 TRGV9Q99603 122 aa9.9□□□□□ -0.82
PCDHGA6-201ENST00000517434 ZFHX2Q9C0A1 2572 aaPredicted RBP9.9□□□□□ -0.83
PCDHGA6-201ENST00000517434 KLRD1Q13241 179 aa9.9□□□□□ -0.83
PCDHGA6-201ENST00000517434 Q6ZRM9 215 aa9.9□□□□□ -0.83
PCDHGA6-201ENST00000517434 FAM231DQ6ZW35 169 aa9.9□□□□□ -0.83
PCDHGA6-201ENST00000517434 CEND1Q8N111 149 aa9.9□□□□□ -0.83
PCDHGA6-201ENST00000517434 PYGO2Q9BRQ0 406 aa9.9□□□□□ -0.83
PCDHGA6-201ENST00000517434 V9GYV3 84 aa9.9□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGHV3OR16-8A0A075B7F1 116 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 AMTNQ6UX39 209 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 SH2D1AO60880 128 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 ARMS2P0C7Q2 107 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 LINC00158P58513 81 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 MYMXA0A1B0GTQ4 84 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 NPC2P61916 151 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 PNRC2Q9NPJ4 139 aaKnown RBP9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 TP53BP1Q12888 1972 aaPredicted RBP9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 POLEQ07864 2286 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 WNK2Q9Y3S1 2297 aa9.89□□□□□ -0.83
PCDHGA6-201ENST00000517434 PLXNA4Q9HCM2 1894 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 USF3Q68DE3 2245 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms