RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 REG4Q9BYZ8 158 aa2.22□□□□□ -2.05
RNU6-1004P-201ENST00000516584 TPT1P8Q9HAU6 139 aa2.22□□□□□ -2.05
RNU6-1004P-201ENST00000516584 RGS12O14924 1447 aa2.22□□□□□ -2.05
RNU6-1004P-201ENST00000516584 SMIM24O75264 130 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 TRACP01848 142 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 SAA1P0DJI8 122 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 SLC25A4P12235 298 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 LSM3P62310 102 aaKnown RBP2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 BLCAPP62952 87 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 FER1L6Q2WGJ9 1857 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 GLYATL3Q5SZD4 288 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 TEX261Q6UWH6 196 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 MAGOHBQ96A72 148 aaKnown RBP2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 TNFSF18Q9UNG2 199 aa2.21□□□□□ -2.06
RNU6-1004P-201ENST00000516584 TRGV2A0A075B6R0 118 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 A0A087WSZ3 146 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 LOC107986453A0A1B0GWG9 222 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 J3QR89 54 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 CXCL8P10145 99 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 DIAPH2-AS1Q14236 149 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 HAGHLQ6PII5 290 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 GKN2Q86XP6 184 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 C15orf53Q8NAA6 179 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 OR5AK2Q8NH90 309 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 NABP2Q9BQ15 211 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 CST11Q9H112 138 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 NUMA1Q14980 2115 aa2.2□□□□□ -2.06
RNU6-1004P-201ENST00000516584 ZNF727A8MUV8 499 aa2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 HYPMO75409 117 aa2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 RNASE3P12724 160 aaKnown RBP2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 SNRPD3P62318 126 aaKnown RBP2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 QRFPP83859 136 aa2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 ZNF833PQ6ZTB9 187 aa2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 ZCCHC13Q8WW36 166 aaKnown RBP2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 PAIP2BQ9ULR5 123 aaKnown RBP2.19□□□□□ -2.06
RNU6-1004P-201ENST00000516584 STRCP1A6NGW2 1772 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 LOC107984156A0A0G2JMH3 177 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 C3orf85A0A1B0GTC6 90 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 ZNF736B4DX44 427 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 K7ERU9 68 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 IGLC6P0CF74 106 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 LINC00694P0DN24 101 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 AKR1D1P51857 326 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 PCBD1P61457 104 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 CNBPP62633 177 aaKnown RBP2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 ARL17AQ8IVW1 177 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 Q8N2B8 174 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 MMGT1Q8N4V1 131 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 OR4C6Q8NH72 309 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 C4orf3Q8WVX3 66 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 PSMF1Q92530 271 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 LPAR5Q9H1C0 372 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 COMMD3Q9UBI1 195 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 SOX21Q9Y651 276 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 PLXNA3P51805 1871 aa2.18□□□□□ -2.06
RNU6-1004P-201ENST00000516584 OVOS2A0A0J9YW53 1432 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 TNS3Q68CZ2 1445 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 OVOS2Q6IE36 1432 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 A0A096LPI6 279 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 EFCAB10A6NFE3 127 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 HLA-DRB4P13762 266 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 HIST1H1BP16401 226 aaKnown RBP2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 GLIPR1L1Q6UWM5 242 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 TMEM91Q6ZNR0 172 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 OR5AS1Q8N127 324 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 LINC00269Q8N2A0 174 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 KLK9Q9UKQ9 250 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 HLA-DRB4X5D2U9 266 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 SYNJ1O43426 1573 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 BICRAQ9NZM4 1560 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 COL4A5P29400 1685 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 MGAMO43451 1857 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 ANAPC1Q9H1A4 1944 aa2.17□□□□□ -2.06
RNU6-1004P-201ENST00000516584 MYH10P35580 1976 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 VWDEQ8N2E2 1590 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 CD14P08571 375 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 KRTAP6-3Q3LI67 103 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 PCOTHQ58A44 107 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 CTAGE3PQ8IX95 158 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 FAM19A2Q8N3H0 131 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 ZNF431Q8TF32 576 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 DISP2A7MBM2 1401 aa2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 KDM6AO15550 1401 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1004P-201ENST00000516584 CCL16O15467 120 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 CCL4P13236 92 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 KDELR1P24390 212 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 CKS2P33552 79 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 NCS1P62166 190 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 RPS25P62851 125 aaKnown RBP2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 MIR22HGQ0VDD5 57 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 FAM74A1Q5RGS3 127 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 CASC2Q6XLA1 102 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 OTOSQ8NHW6 89 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 CDC42SE1Q9NRR8 79 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 ERG28Q9UKR5 140 aa2.15□□□□□ -2.07
RNU6-1004P-201ENST00000516584 COL1A1P02452 1464 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1004P-201ENST00000516584 FAM236AA0A1B0GUQ0 79 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms