RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 N4BP2Q86UW6 1770 aaPredicted RBP-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 FREM2Q5SZK8 3169 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 TMEM94Q12767 1356 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 TRBV7-1A0A0A6YYK4 115 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 M0R2P5 195 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 NPFFO15130 113 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 MT2AP02795 61 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 STMN1P16949 149 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 TAGLN2P37802 199 aaKnown RBP-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 CAV1Q03135 178 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 SMAGPQ0VAQ4 97 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 EXOC3L4Q17RC7 722 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 LRRC23Q53EV4 343 aaPredicted RBP-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 FBXO48Q5FWF7 155 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 PDZD9Q8IXQ8 264 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 LRRC18Q8N456 261 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 ZHX1-C8orf76Q96EF9 292 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 FAM210AQ96ND0 272 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 AP1S3Q96PC3 154 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 PKIBQ9C010 78 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 MS4A6AQ9H2W1 248 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 DBNDD1Q9H9R9 158 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 ZFHX4Q86UP3 3567 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 USP54Q70EL1 1684 aa-3.46□□□□□ -2.96
RNU6-542P-201ENST00000516405 GOLGA8QA0A0J9YX86 632 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 GOLGA8OA6NCC3 632 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 F5H5K5 113 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 GOLGA8NF8WBI6 632 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 NEMFO60524 1076 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 MT1EP04732 61 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 OR10J4P0C629 311 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 RANBP1P43487 201 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 RPL5P46777 297 aaKnown RBP-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 RAB5CP51148 216 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 CARD17Q5XLA6 110 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 EIF3MQ7L2H7 374 aaKnown RBP-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 SYS1Q8N2H4 156 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 TMEM161BQ8NDZ6 487 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 MCUR1Q96AQ8 359 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 SMIM12Q96EX1 92 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 CST11Q9H112 138 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 CHRAC1Q9NRG0 131 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 RMND1Q9NWS8 449 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 EURLQ9NYK6 297 aa-3.47□□□□□ -2.96
RNU6-542P-201ENST00000516405 TEX50A0A1B0GTY4 177 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 LOC107986453A0A1B0GWG9 222 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 hDV103S1A0JD37 113 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 CXCL11O14625 94 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 BRI3O95415 125 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 IFNA10P01566 189 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 TCRBP04435 133 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 CCKP06307 115 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 S100A4P26447 101 aaKnown RBP-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 RPS5P46782 204 aaKnown RBP-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 YPEL3P61236 119 aaPredicted RBP-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 DIAPH2-AS1Q14236 149 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 SPOPLQ6IQ16 392 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 LINC00269Q8N2A0 174 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 DEFB123Q8N688 67 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 OR6N2Q8NGY6 317 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 PPP1R1CQ8WVI7 109 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 TMEM126AQ9H061 195 aa-3.48□□□□□ -2.97
RNU6-542P-201ENST00000516405 LRPPRCP42704 1394 aaKnown RBP-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 GOLGA8IPA6NC78 632 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 ZNF670-ZNF695F2Z2N8 137 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 IGKCP01834 107 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 ISG15P05161 165 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 ATP6V1E1P36543 226 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 KLRD1Q13241 179 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 CAVIN4Q5BKX8 364 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 LYPD5Q6UWN5 251 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 C3orf62Q6ZUJ4 267 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 LRRC25Q8N386 305 aaPredicted RBP-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 OR5D16Q8NGK9 328 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 MT1LQ93083 61 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 RASD2Q96D21 266 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 DMAC1Q96GE9 116 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 CNBD2Q96M20 576 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 OR4C12Q96R67 309 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 BPIFA3Q9BQP9 254 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 UPF3BQ9BZI7 483 aaKnown RBP-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 OR52A5Q9H2C5 316 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 C11orf68Q9H3H3 251 aaKnown RBP-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 APLNQ9ULZ1 77 aa-3.49□□□□□ -2.97
RNU6-542P-201ENST00000516405 ZNF609O15014 1411 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 TEX49A0A1B0GTD5 131 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 TPST1O60507 370 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 MARCKSL1P49006 195 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 HNMTP50135 292 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 RAB8AP61006 207 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 KRTAP19-6Q3LI70 58 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 COMMD7Q86VX2 200 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 SLC25A40Q8TBP6 338 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 TSEN15Q8WW01 171 aaKnown RBP-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 TOMM6Q96B49 74 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 DHRS9Q9BPW9 319 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 SCN3BQ9NY72 215 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 MGAQ8IWI9 3026 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 ZMYM4Q5VZL5 1548 aa-3.5□□□□□ -2.97
RNU6-542P-201ENST00000516405 UBR2Q8IWV8 1755 aa-3.51□□□□□ -2.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms