RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ORAOV1Q8WV07 137 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 DEDD2Q8WXF8 326 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 TESCQ96BS2 214 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 TMEM208Q9BTX3 173 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 VCX3BQ9H321 246 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF230Q9UIE0 474 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 DSCAML1Q8TD84 2053 aa1.94□□□□□ -2.1
TOPBP1-208ENST00000511439 IGHV7-4-1A0A0J9YVY3 117 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 LOC389332A0A1B0GUA5 103 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 ODAMA1E959 279 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 SMIM9A6NGZ8 99 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 COLCA2A8K830 154 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 NDUFC2-KCTD14E9PQ53 114 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 SERPINB7O75635 380 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 SCO1O75880 301 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 CPSF4O95639 269 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 IGLV3-1P01715 115 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 TYMSP04818 313 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 TSPAN19P0C672 248 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 LINC00869P0C866 280 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 PSMD7P51665 324 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 CDC42P60953 191 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 ATP5G2Q06055 141 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 LTC4SQ16873 150 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 UBE2NLQ5JXB2 153 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 STX12Q86Y82 276 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 KRTCAP2Q8N6L1 136 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 GATD1Q8NB37 220 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 OR5A2Q8NGI9 324 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 OR5D18Q8NGL1 313 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 GHSRQ92847 366 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 MRPL57Q9BQC6 102 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 CHCHD7Q9BUK0 85 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 C9orf16Q9BUW7 83 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF436Q9C0F3 470 aaPredicted RBP1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 SLC25A31Q9H0C2 315 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 OR52D1Q9H346 318 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 COA4Q9NYJ1 87 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 IDI2-AS1Q9NZ38 188 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 UFC1Q9Y3C8 167 aa1.93□□□□□ -2.1
TOPBP1-208ENST00000511439 TRAV5A0A0B4J249 113 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 A0A1W2PQL4 384 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 FAM159BA6NKW6 160 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 C9JCJ5 164 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 C9JQL5 133 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 K7EP13 123 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 SLC22A1O15245 554 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 COX7A2P2O60397 106 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 KRT75O95678 551 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 CA2P00918 260 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 SCGB1C2P0DMR2 95 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 CRYGAP11844 174 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 HSD11B1P28845 292 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 OPRK1P41145 380 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF137PP52743 207 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 KRTAP10-10P60014 251 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 GRB2P62993 217 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 RHOGP84095 191 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 TSPAN31Q12999 210 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 C4orf26Q17RF5 130 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 ESRGQ1W209 222 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 YIF1BQ5BJH7 314 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 MESTQ5EB52 335 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 DHRS4L2Q6PKH6 230 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 MSRB3Q8IXL7 192 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 LINC00471Q8N535 108 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF709Q8N972 641 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 SCGB1C1Q8TD33 95 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 CYGBQ8WWM9 190 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 ASB13Q8WXK3 278 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 TLCD1Q96CP7 247 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 FMC1Q96HJ9 113 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 YPEL4Q96NS1 127 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 OR2A7Q96R45 310 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 AMELYQ99218 206 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 FBXL15Q9H469 300 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 MAP1LC3AQ9H492 121 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 LINC00846Q9NV44 126 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 TVP23BQ9NYZ1 205 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 S4R3C0 116 aa1.92□□□□□ -2.1
TOPBP1-208ENST00000511439 TRAV8-3A0A0A6YYJ7 113 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 PRORSD1PA6NEY8 169 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 OR2T8A6NH00 312 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 METTL15A6NJ78 407 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 CPSF4LA6NMK7 179 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 PLIN3O60664 434 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 DHRS3O75911 302 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 IL6P05231 212 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 CTSDP07339 412 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 HIST1H1EP10412 219 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 PSMA1P25786 263 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 CRABP1P29762 137 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 RPL12P30050 165 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 NUDT2P50583 147 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 VBP1P61758 197 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 KRR1Q13601 381 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 FXYD3Q14802 87 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 SSX1Q16384 188 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 TDRG1Q3Y452 100 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms