RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 OR11H4Q8NGC9 324 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 OR8A1Q8NGG7 326 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 IL17DQ8TAD2 202 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 FXYD5Q96DB9 178 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 C20orf173Q96LM9 149 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 C17orf77Q96MU5 243 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 OVOL2Q9BRP0 275 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 SH3BGRL3Q9H299 93 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 TMEM167BQ9NRX6 74 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 AGRNO00468 2067 aa6.71□□□□□ -1.34
NUP54-207ENST00000508583 DNAH9Q9NYC9 4486 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 CTXND1A0A1B0GTU2 59 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 SLC17A3O00476 420 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 SEC11BP0C7V7 166 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 TSPOP30536 169 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 CNN1P51911 297 aaKnown RBP6.7□□□□□ -1.34
NUP54-207ENST00000508583 HIST1H1AQ02539 215 aaPredicted RBP6.7□□□□□ -1.34
NUP54-207ENST00000508583 GDF5OSQ5U4N7 250 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 DPPA3Q6W0C5 159 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 TMUB2Q71RG4 321 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 BAP18Q8IXM2 172 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 RPP25LQ8N5L8 163 aaKnown RBP6.7□□□□□ -1.34
NUP54-207ENST00000508583 STOML3Q8TAV4 291 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 CMTM2Q8TAZ6 248 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 RXFP4Q8TDU9 374 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 RAB24Q969Q5 203 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 RARRES2Q99969 163 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 CYTL1Q9NRR1 136 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 GOLT1BQ9Y3E0 138 aa6.7□□□□□ -1.34
NUP54-207ENST00000508583 A8MTW9 85 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 F6UB75 175 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 H3BTX0 84 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 BOLA2-SMG1P6H3BVE0 249 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 IGKV3-20P01619 116 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 SNRPCP09234 159 aaKnown RBP6.69□□□□□ -1.34
NUP54-207ENST00000508583 STAG3L2P0CL84 134 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 STAG3L3P0CL85 134 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 ARL14EPLP0DKL9 152 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 MIFP14174 115 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 IGFL4Q6B9Z1 124 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 ARL6IP6Q8N6S5 226 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 OR11H2Q8NH07 326 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 ODF3Q96PU9 254 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 RETNQ9HD89 108 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 OTORQ9NRC9 128 aa6.69□□□□□ -1.34
NUP54-207ENST00000508583 SERTM2A0A1B0GWG4 89 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 TEX46H3BTG2 121 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 NDUFB4O95168 129 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 INSP01308 110 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 SLC25A5P05141 298 aaKnown RBP6.68□□□□□ -1.34
NUP54-207ENST00000508583 HLA-DMBP28068 263 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 LEPP41159 167 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 CDKN1BP46527 198 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 RAB5CP51148 216 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 RANP62826 216 aaKnown RBP6.68□□□□□ -1.34
NUP54-207ENST00000508583 ICAM4Q14773 271 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 SLC51BQ86UW2 128 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 IQCF2Q8IXL9 164 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 TMEM256Q8N2U0 113 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 IGF2BP2-AS1Q96M15 143 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 NKX6-2Q9C056 277 aaPredicted RBP6.68□□□□□ -1.34
NUP54-207ENST00000508583 Q9H3A6 140 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 XCL2Q9UBD3 114 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 RFNGQ9Y644 331 aa6.68□□□□□ -1.34
NUP54-207ENST00000508583 TENM3Q9P273 2699 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 TMEM189A5PLL7 270 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 RBAKDNA6NC62 111 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 NPIPB6E9PJ23 425 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 K7EQM0 130 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 GIG44P09565 113 aaPredicted RBP6.67□□□□□ -1.34
NUP54-207ENST00000508583 GCHFRP30047 84 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 LGALSLQ3ZCW2 172 aaPredicted RBP6.67□□□□□ -1.34
NUP54-207ENST00000508583 XP32Q5T750 250 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 AMTNQ6UX39 209 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 EXOC3-AS1Q8N2X6 119 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 PHYHIPLQ96FC7 376 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 NEU1Q99519 415 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 C20orf144Q9BQM9 153 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 TMEM208Q9BTX3 173 aa6.67□□□□□ -1.34
NUP54-207ENST00000508583 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
NUP54-207ENST00000508583 TRBV7-9A0A0J9YWB2 115 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 TEX48A0A1B0GUV7 120 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 A0A1W2PRE2 83 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 MAP1LC3B2A6NCE7 125 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 FBLL1A6NHQ2 334 aaKnown RBP6.66□□□□□ -1.34
NUP54-207ENST00000508583 ZNF705FA8MVS1 300 aaPredicted RBP6.66□□□□□ -1.34
NUP54-207ENST00000508583 ZNF705EA8MWA4 302 aaPredicted RBP6.66□□□□□ -1.34
NUP54-207ENST00000508583 M0R3E3 92 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 HMGB3O15347 200 aaKnown RBP6.66□□□□□ -1.34
NUP54-207ENST00000508583 NMBP08949 121 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 PPT1P50897 306 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 DEFB1P60022 68 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 SPINK13Q1W4C9 94 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 C9orf47Q6ZRZ4 202 aa6.66□□□□□ -1.34
NUP54-207ENST00000508583 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms