RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 HSD17B11Q8NBQ5 300 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 C11orf45Q8TAV5 145 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 IGF2BP2-AS1Q96M15 143 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 NEU1Q99519 415 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 TIMM9Q9Y5J7 89 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 RAB2AP61019 212 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 RHOBP62745 196 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 RNF141Q8WVD5 230 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 PAXXQ9BUH6 204 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 BOLA2-SMG1P6H3BVE0 249 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 ATP6V0CP27449 155 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 PDE6HQ13956 83 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
SMN1-204ENST00000506163 RYR2Q92736 4967 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 CT45A10P0DMU9 189 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 M6PRP20645 277 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 ZNF266Q14584 549 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 CEMP1Q6PRD7 247 aaPredicted RBP12.8□□□□□ -0.36
SMN1-204ENST00000506163 INO80EQ8NBZ0 244 aaPredicted RBP12.8□□□□□ -0.36
SMN1-204ENST00000506163 PHLDA1Q8WV24 401 aaPredicted RBP12.8□□□□□ -0.36
SMN1-204ENST00000506163 PHYHIPLQ96FC7 376 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 SH3BGRL3Q9H299 93 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 OR7C2O60412 319 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 ERCC8Q13216 396 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 ACOT6Q3I5F7 207 aaPredicted RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR11H4Q8NGC9 324 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR2G3Q8NGZ4 309 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 SMIM9A6NGZ8 99 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 NPIPB6E9PJ23 425 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 ICAM4Q14773 271 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 RPP25LQ8N5L8 163 aaKnown RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10G4Q8NGN3 311 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10G9Q8NGN4 311 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10G7Q8NGN6 311 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10J6PQ8NGY7 276 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 PSMG3Q9BT73 122 aaPredicted RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 LCE6AA0A183 80 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
SMN1-204ENST00000506163 HMGB3O15347 200 aaKnown RBP12.78□□□□□ -0.36
SMN1-204ENST00000506163 ARPC5O15511 151 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 INSP01308 110 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 AMBPP02760 352 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 FAM122CQ6P4D5 195 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 ZNF767PQ75MW2 155 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 CYTL1Q9NRR1 136 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 DNAH1Q9P2D7 4330 aa12.77□□□□□ -0.36
SMN1-204ENST00000506163 HYDINQ4G0P3 5121 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 CDKN1BP46527 198 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 EMP1P54849 157 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 UBE2L3P68036 154 aaKnown RBP12.77□□□□□ -0.37
SMN1-204ENST00000506163 C12orf74Q32Q52 190 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 KHDC3LQ587J8 217 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 PPP1R14DQ9NXH3 145 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 PRELID1Q9Y255 219 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 ALMS1Q8TCU4 4167 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 NUPR2A6NF83 97 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 AZU1P20160 251 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
SMN1-204ENST00000506163 Q6ZTC4 211 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 VGLL1Q99990 258 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 IGKV2-40A0A087WW87 121 aaPredicted RBP12.75□□□□□ -0.37
SMN1-204ENST00000506163 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 IGKV2D-40P01614 121 aaPredicted RBP12.75□□□□□ -0.37
SMN1-204ENST00000506163 HBE1P02100 147 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 TAS2R45P59539 299 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 SSX7Q7RTT5 188 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 TMEM208Q9BTX3 173 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 Q9H3A6 140 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 AAMDCQ9H7C9 122 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 LOC102723971A0A1B0GUV8 181 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 SERF2P84101 59 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 RRN3P1Q2M238 152 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 GFI1BQ5VTD9 330 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 RAB24Q969Q5 203 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 DKK2Q9UBU2 259 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 PLAC8L1A1L4L8 177 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 J3KRW8 73 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 FAM222AQ5U5X8 452 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 Q6ZNX1 250 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 PQLC2Q6ZP29 291 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 C9orf47Q6ZRZ4 202 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 ODF3Q96PU9 254 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 LINC01587Q99440 93 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
SMN1-204ENST00000506163 TMEM189A5PLL7 270 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 STAG3L2P0CL84 134 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 STAG3L3P0CL85 134 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 ARL14EPLP0DKL9 152 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 CDC34P49427 236 aaPredicted RBP12.72□□□□□ -0.37
SMN1-204ENST00000506163 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms