RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 SPANXN5Q5MJ07 72 aa6.24□□□□□ -1.41
PTPN20-216ENST00000506080 ACOT7LQ6ZUV0 252 aa6.24□□□□□ -1.41
PTPN20-216ENST00000506080 MIXL1Q9H2W2 232 aa6.24□□□□□ -1.41
PTPN20-216ENST00000506080 ICOSQ9Y6W8 199 aa6.24□□□□□ -1.41
PTPN20-216ENST00000506080 PMS2P5A8MQ11 134 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 RGS5O15539 181 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 MED6O75586 246 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 LINC00869P0C866 280 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 ANXA3P12429 323 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 ANXA7P20073 488 aaKnown RBP6.23□□□□□ -1.41
PTPN20-216ENST00000506080 DAZ2Q13117 558 aaKnown RBP6.23□□□□□ -1.41
PTPN20-216ENST00000506080 SMIM4Q8WVI0 70 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 SCGB3A2Q96PL1 93 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 NAA50Q9GZZ1 169 aaKnown RBP6.23□□□□□ -1.41
PTPN20-216ENST00000506080 GSN-AS1Q9NRJ2 163 aa6.23□□□□□ -1.41
PTPN20-216ENST00000506080 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 LINC00854A0A1B0GVQ3 168 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 H3BTX0 84 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 MRPS12O15235 138 aaKnown RBP6.22□□□□□ -1.41
PTPN20-216ENST00000506080 SYNGR2O43760 224 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 IGHV3-53P01767 116 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 SRPXP78539 464 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 MRPS10P82664 201 aaKnown RBP6.22□□□□□ -1.41
PTPN20-216ENST00000506080 PATE2Q6UY27 113 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 CIB3Q96Q77 187 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-216ENST00000506080 ARL6Q9H0F7 186 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 ZNF331Q9NQX6 463 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-216ENST00000506080 MCUBQ9NWR8 336 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 MSRB1Q9NZV6 116 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 SCP2D1Q9UJQ7 156 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 FUT9Q9Y231 359 aa6.22□□□□□ -1.41
PTPN20-216ENST00000506080 TRAV9-2A0A087WT02 112 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 DUXBA0A1W2PPF3 345 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 ANKRD20A5PA0PJZ0 165 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 ZNF324O75467 553 aaPredicted RBP6.21□□□□□ -1.42
PTPN20-216ENST00000506080 CXCL2P19875 107 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 PLP1P60201 277 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 LCN15Q6UWW0 184 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 ZNF431Q8TF32 576 aaPredicted RBP6.21□□□□□ -1.42
PTPN20-216ENST00000506080 PYGO2Q9BRQ0 406 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 ARV1Q9H2C2 271 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 STRAPQ9Y3F4 350 aaKnown RBP6.21□□□□□ -1.42
PTPN20-216ENST00000506080 LY96Q9Y6Y9 160 aa6.21□□□□□ -1.42
PTPN20-216ENST00000506080 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 KRTAP29-1A8MX34 341 aaPredicted RBP6.2□□□□□ -1.42
PTPN20-216ENST00000506080 SLC17A3O00476 420 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 CTDSP2O14595 271 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 CT45A10P0DMU9 189 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 LEPP41159 167 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 RRAS2P62070 204 aaPredicted RBP6.2□□□□□ -1.42
PTPN20-216ENST00000506080 IL18Q14116 193 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 WFDC10BQ8IUB3 73 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 C11orf72Q8NBR9 251 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 LINC00467Q9BRT7 94 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 TMEM70Q9BUB7 260 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 FAM30AQ9NZY2 134 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 KLF12Q9Y4X4 402 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 DNAH8Q96JB1 4490 aa6.2□□□□□ -1.42
PTPN20-216ENST00000506080 PRAF2O60831 178 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 CCNKO75909 580 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 HOXB5P09067 269 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 SLC25A6P12236 298 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 VAMP1P23763 118 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 SELENOTP62341 195 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 SLC38A11Q08AI6 406 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 CTF1Q16619 201 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 TEPPQ6URK8 271 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 S100A7AQ86SG5 101 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 ZBTB8BQ8NAP8 495 aaPredicted RBP6.19□□□□□ -1.42
PTPN20-216ENST00000506080 ZNF680Q8NEM1 530 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 RABL2BQ9UNT1 228 aa6.19□□□□□ -1.42
PTPN20-216ENST00000506080 PIGBOS1A0A0B4J2F0 54 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 CTDSPLO15194 276 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 PSCAO43653 123 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 SPINK4O60575 86 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 EVI2AP22794 236 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 CRYBA4P53673 196 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 POLR2GP62487 172 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPN20-216ENST00000506080 MRPL23Q16540 153 aaKnown RBP6.18□□□□□ -1.42
PTPN20-216ENST00000506080 SERTAD4-AS1Q5TG53 156 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 MORN5Q5VZ52 161 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 NEGR1Q7Z3B1 354 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 LINC00305Q7Z4B0 112 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 BPIFA4PQ86YQ2 179 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 DIRAS2Q96HU8 199 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 ST6GAL2Q96JF0 529 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 MRPL16Q9NX20 251 aaKnown RBP6.18□□□□□ -1.42
PTPN20-216ENST00000506080 PSENENQ9NZ42 101 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 PRO0255Q9UI72 69 aa6.18□□□□□ -1.42
PTPN20-216ENST00000506080 C7orf71A4D174 169 aa6.17□□□□□ -1.42
PTPN20-216ENST00000506080 E5RGE8 158 aa6.17□□□□□ -1.42
PTPN20-216ENST00000506080 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
PTPN20-216ENST00000506080 CD300CQ08708 224 aa6.17□□□□□ -1.42
PTPN20-216ENST00000506080 ERCC8Q13216 396 aa6.17□□□□□ -1.42
PTPN20-216ENST00000506080 BTN1A1Q13410 526 aa6.17□□□□□ -1.42
PTPN20-216ENST00000506080 TMEM128Q5BJH2 165 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms