RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 PRSS33Q8NF86 280 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 ZNF71Q9NQZ8 489 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 MRPL35Q9NZE8 188 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 MRPL27Q9P0M9 148 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 RNF7Q9UBF6 113 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 SPENQ96T58 3664 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 CENPEQ02224 2701 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 CHD8Q9HCK8 2581 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 NPIPB6E9PJ23 425 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 H3BRM9 83 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 ZNF134P52741 427 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 DIAPH2-AS1Q14236 149 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 PKIBQ9C010 78 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 PHLDA3Q9Y5J5 127 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 NAV2Q8IVL1 2488 aa6.31□□□□□ -1.4
ATP2C1-208ENST00000504948 F2RL2O00254 374 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 ZNF56Q15929 161 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 MRAP2Q96G30 205 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 PLSCR4Q9NRQ2 329 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 TPSG1Q9NRR2 321 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 POLQO75417 2590 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 NPYP01303 97 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 FOXE3Q13461 319 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 WDR86Q86TI4 376 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 KIR2DL4Q99706 377 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 MS4A6AQ9H2W1 248 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 SIGLEC8Q9NYZ4 499 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 G3V4G9 280 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 ERVK11-1P61568 191 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 Q6P435 159 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 KLHL30-AS1Q8NEE0 82 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 THADAQ6YHU6 1953 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 C2orf70A6NJV1 201 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 TOMM40O96008 361 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 PPBPP02775 128 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 TMEM133Q9H2Q1 129 aa6.3□□□□□ -1.4
ATP2C1-208ENST00000504948 CFPP27918 469 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 HLA-DMBP28068 263 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 ERCC8Q13216 396 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 ZNF474Q6S9Z5 364 aaPredicted RBP6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 ZNF329Q86UD4 541 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 CHCHD1Q96BP2 118 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 TIMD4Q96H15 378 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 ARRDC1-AS1Q9H2J1 176 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 NCOR1P1Q9H4R4 102 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 H0YJW9 148 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 SRSF6Q13247 344 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 OSR1Q8TAX0 266 aaPredicted RBP6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 EDA2RQ9HAV5 297 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 LINC00322Q6ZN03 302 aaPredicted RBP6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 ZNF747Q9BV97 191 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 MTORP42345 2549 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 NUP210LQ5VU65 1888 aa6.29□□□□□ -1.4
ATP2C1-208ENST00000504948 IGHV3OR16-12A0A075B7B8 117 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 IGKV1OR2-108A0A075B7D4 117 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 TRAV8-3A0A0A6YYJ7 113 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 LY6HO94772 140 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 CNTFRP26992 372 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 CTRLP40313 264 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 KIR2DS2P43631 304 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 TMEM78Q5T7P6 136 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 TMEM42Q69YG0 159 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 ATMQ13315 3056 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 DMXL1Q9Y485 3027 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 A0A1W2PR77 199 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 SRRM4A7MD48 611 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 SLC25A16P16260 332 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 LINC00596Q86U02 117 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 GGNQ86UU5 652 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 OR9G4Q8NGQ1 327 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 JPT1Q9UK76 154 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 IGHV3-73A0A0B4J1V6 119 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 TMEM262E9PQX1 116 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 UPK2O00526 184 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 NDPQ00604 133 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 FAM27E3Q08E93 113 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 TMEM249Q2WGJ8 235 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 IMMP1LQ96LU5 166 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 GATA3P23771 443 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 RNF182Q8N6D2 247 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 GTSF1Q8WW33 167 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 DLX4Q92988 240 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 ABHD17AQ96GS6 310 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 C16orf92Q96LL3 132 aa6.28□□□□□ -1.4
ATP2C1-208ENST00000504948 PAX1P15863 534 aa6.27□□□□□ -1.41
ATP2C1-208ENST00000504948 IGHV1-2P23083 117 aa6.27□□□□□ -1.41
ATP2C1-208ENST00000504948 MEIG1Q5JSS6 88 aa6.27□□□□□ -1.41
ATP2C1-208ENST00000504948 ABCA12Q86UK0 2595 aa6.27□□□□□ -1.41
ATP2C1-208ENST00000504948 TRBV25-1A0A075B6N4 114 aa6.27□□□□□ -1.41
ATP2C1-208ENST00000504948 TCRBV4S1A1TA0A5B7 111 aa6.27□□□□□ -1.41
ATP2C1-208ENST00000504948 CCDC144NLQ6NUI1 221 aa6.27□□□□□ -1.41
ATP2C1-208ENST00000504948 CRIP3Q6Q6R5 217 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms