RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 SHANK1Q9Y566 2161 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 SRRM5B3KS81 715 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 IGHG3P01860 377 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 BAALCQ8WXS3 180 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 A0A096LPE4 126 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.91□□□□□ -1.62
LINC02397-201ENST00000504409 A0A1B0GXF2 115 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 A0A1W2PPZ6 126 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 NDUFS5O43920 106 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 SAA1P0DJI8 122 aaPredicted RBP4.91□□□□□ -1.62
LINC02397-201ENST00000504409 C17orf98A8MV24 154 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 PRR20EP86478 221 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 PRR20CP86479 221 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 PRR20DP86480 221 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 PRR20BP86481 221 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 PRR20AP86496 221 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 LYZL1Q6UWQ5 148 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 C2orf70A6NJV1 201 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 DEFB108AA8MXU0 73 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 SAA2P0DJI9 122 aaPredicted RBP4.91□□□□□ -1.62
LINC02397-201ENST00000504409 INTS1Q8N201 2190 aaKnown RBP4.91□□□□□ -1.62
LINC02397-201ENST00000504409 VEGFBP49765 207 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 PTCRAQ6ISU1 281 aaPredicted RBP4.91□□□□□ -1.62
LINC02397-201ENST00000504409 NDUFA11Q86Y39 141 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 Q8N1Y9 231 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 TOMM6Q96B49 74 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 LINC00527Q9UJ94 153 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 FAM90A27PA6NNH2 459 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 NXPH1P58417 271 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 PPDPFQ9H3Y8 114 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 F8WDY8 70 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 CCL14Q16627 93 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 C16orf54Q6UWD8 224 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 ZC2HC1AQ96GY0 325 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 C11orf1Q9H5F2 150 aa4.91□□□□□ -1.62
LINC02397-201ENST00000504409 ARHGAP21Q5T5U3 1957 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 H7C423 109 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 NRACQ8N912 160 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 KLF14Q8TD94 323 aaPredicted RBP4.9□□□□□ -1.62
LINC02397-201ENST00000504409 CCL26Q9Y258 94 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 U3KQK5 164 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 TRAV12-2A0A075B6T6 113 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 LOC102723996A0A087X1L8 192 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 TRBV7-7A0A0K0K1E9 115 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 CCL4P13236 92 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 C1orf195Q5TG92 126 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 CFAP126Q5VTH2 177 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 DUX4L9Q6RFH8 374 aaPredicted RBP4.9□□□□□ -1.62
LINC02397-201ENST00000504409 VSIRQ9H7M9 311 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 DIDO1Q9BTC0 2240 aaKnown RBP4.9□□□□□ -1.62
LINC02397-201ENST00000504409 IGHV1-58A0A0C4DH39 117 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 PSMB8P28062 276 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 F8WEM9 126 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 CR1LQ2VPA4 569 aa4.9□□□□□ -1.62
LINC02397-201ENST00000504409 TRBV19A0A075B6N1 114 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 F5H768 121 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 M0R1W7 72 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 SH2D1AO60880 128 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 KIAA1549Q9HCM3 1950 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 LGALS9O00182 355 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 CCL5P13501 91 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 CD33P20138 364 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 SMIM14Q96QK8 99 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 CRYGBP07316 175 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 NDUFA4L2Q9NRX3 87 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 DPM3Q9P2X0 92 aa4.9□□□□□ -1.63
LINC02397-201ENST00000504409 C1orf147Q96MC9 270 aaPredicted RBP4.89□□□□□ -1.63
LINC02397-201ENST00000504409 RPL18AQ02543 176 aaKnown RBP4.89□□□□□ -1.63
LINC02397-201ENST00000504409 SPINK9Q5DT21 86 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 SSC4DQ8WTU2 575 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 EXPH5Q8NEV8 1989 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 EGR2P11161 476 aaPredicted RBP4.89□□□□□ -1.63
LINC02397-201ENST00000504409 CSRP2Q16527 193 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 C6orf106Q9H6K1 298 aaPredicted RBP4.89□□□□□ -1.63
LINC02397-201ENST00000504409 COL4A6Q14031 1691 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 IGKV1D-13A0A0B4J2D9 117 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 LOC107984640A0A0U1RRK4 108 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 CD55P08174 381 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 IGKV1-13P0DP09 117 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 TRAV8-3A0A0A6YYJ7 113 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 ZNF726P1Q15940 193 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 CRYGAP11844 174 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 RFESDQ8TAC1 157 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 TRAV40A0A0B4J280 105 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 FUSP35637 526 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC02397-201ENST00000504409 NEU4Q8WWR8 484 aaPredicted RBP4.89□□□□□ -1.63
LINC02397-201ENST00000504409 A0A1W2PRX2 142 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 FAM74A4Q5TZK3 123 aa4.89□□□□□ -1.63
LINC02397-201ENST00000504409 C1orf61Q13536 156 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 Q8TCH9 128 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 ZNF501Q96CX3 271 aaPredicted RBP4.88□□□□□ -1.63
LINC02397-201ENST00000504409 RNF186Q9NXI6 227 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 ASCC3Q8N3C0 2202 aaKnown RBP4.88□□□□□ -1.63
LINC02397-201ENST00000504409 H3BRN7 92 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 ELNP15502 786 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
LINC02397-201ENST00000504409 Q6JHZ5 121 aa4.88□□□□□ -1.63
LINC02397-201ENST00000504409 PRSS22Q9GZN4 317 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms