RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PSMB2P49721 201 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 KLK7P49862 253 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 DAPP51397 102 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 KRTDAPP60985 99 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 ERVK-16P61578 105 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 UBE2G1P62253 170 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 GNB2P62879 340 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 UBE2L3P68036 154 aaKnown RBP1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 Q1RN00 199 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 LINC00303Q3SY05 128 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 ETDBQ3ZM63 59 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 LRRC37A5PQ49AS3 106 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM155Q4W5P6 130 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 NMSQ5H8A3 153 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF678Q5SXM1 525 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 RPL7L1Q6DKI1 246 aaKnown RBP1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 LINC00305Q7Z4B0 112 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 VN1R4Q7Z5H5 301 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 SPATA12Q7Z6I5 190 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 AMN1Q8IY45 258 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 PIANPQ8IYJ0 282 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 LINC01561Q8N1V8 128 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 LINC00471Q8N535 108 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 LINC00311Q8N616 119 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 RNF182Q8N6D2 247 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF645Q8N7E2 425 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CYB561D1Q8N8Q1 229 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 PPP1R1CQ8WVI7 109 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 SLC25A38Q96DW6 304 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM19A4Q96LR4 140 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CARD19Q96LW7 228 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 METTL26Q96S19 204 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 AMELYQ99218 206 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 NAA38Q9BRA0 125 aaKnown RBP1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 TXNDC17Q9BRA2 123 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 PAXXQ9BUH6 204 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 C16orf95Q9H693 158 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 Q9HAA7 133 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 OTORQ9NRC9 128 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CMC2Q9NRP2 79 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CKLFQ9UBR5 152 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 PCTPQ9UKL6 214 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAPPC1Q9Y5R8 145 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 COL5A3P25940 1745 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 DOT1LQ8TEK3 1739 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 WDR90Q96KV7 1748 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 NLRC5Q86WI3 1866 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 PLXNA4Q9HCM2 1894 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 NHSQ6T4R5 1651 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 ROBO1Q9Y6N7 1651 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 ARFGEF1Q9Y6D6 1849 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 ALPK3Q96L96 1907 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 THSD7BQ9C0I4 1608 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 KMT2EQ8IZD2 1858 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 KIF26AQ9ULI4 1882 aaPredicted RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 NRAPQ86VF7 1730 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 PIGBOS1A0A0B4J2F0 54 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGHV3-38A0A0C4DH36 116 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRBV5-5A0A0J9YX44 114 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRBV27A0A0K0K1C4 114 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF736B4DX44 427 aaPredicted RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 C8orf87E5RJ46 101 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 F2Z2F3 143 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 C19orf84I3L1E1 186 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 SDCBPO00560 298 aaPredicted RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 NDUFC1O43677 76 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 SYNGR2O43760 224 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 OR1I1O60431 355 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 SS18L1O75177 396 aaPredicted RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 SERF1AO75920 110 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGKV1D-16P01601 117 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGKCP01834 107 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGKV5-2P06315 115 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 SCGB1C2P0DMR2 95 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 MYCNOSP40205 109 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 SSR2P43308 183 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 RPL34P49207 117 aaKnown RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 HIST1H4AP62805 103 aaKnown RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 CCL8P80075 99 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 ADIGQ0VDE8 80 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 C2orf83Q53S99 150 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM170BQ5T4T1 132 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 LGALS9CQ6DKI2 356 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 C2orf91Q6ZV80 131 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 PHF5AQ7RTV0 110 aaKnown RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 BAGE3Q86Y29 109 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 BAGE2Q86Y30 109 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 CLDND2Q8NHS1 167 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF564Q8TBZ8 553 aaPredicted RBP1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 NABP1Q96AH0 204 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 TOMM6Q96B49 74 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 ABHD14BQ96IU4 210 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRGV9Q99603 122 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 CHAC1Q9BUX1 264 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 OCR1Q9BZK8 76 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 SLC25A22Q9H936 323 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 RBM12B-AS1Q9P1G2 102 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF835Q9Y2P0 537 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 LY96Q9Y6Y9 160 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms