RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 BTF3L4Q96K17 158 aa6.89□□□□□ -1.31
NR1I3-216ENST00000502848 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
NR1I3-216ENST00000502848 IMMP2LQ96T52 175 aa6.89□□□□□ -1.31
NR1I3-216ENST00000502848 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
NR1I3-216ENST00000502848 MTORP42345 2549 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 CCL24O00175 119 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 GCGP01275 180 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 CD28P10747 220 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 ID1P41134 155 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 PAFAH1B2P68402 229 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 ADIRFQ15847 76 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 SAPCD1Q5SSQ6 148 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 GOLT1AQ6ZVE7 132 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 Q71RC1 249 aaPredicted RBP6.88□□□□□ -1.31
NR1I3-216ENST00000502848 Q86TA4 180 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 BAGE2Q86Y30 109 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 OR2K2Q8NGT1 345 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 CITED2Q99967 270 aaPredicted RBP6.88□□□□□ -1.31
NR1I3-216ENST00000502848 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 RPS10P5Q9NQ39 176 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 ZFHX3Q15911 3703 aa6.88□□□□□ -1.31
NR1I3-216ENST00000502848 TRAV9-1A0A075B6T8 112 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 OVOL1O14753 267 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 ZNF207O43670 478 aaKnown RBP6.87□□□□□ -1.31
NR1I3-216ENST00000502848 FOLR2P14207 255 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 FLI1Q01543 452 aaPredicted RBP6.87□□□□□ -1.31
NR1I3-216ENST00000502848 CT83Q5H943 113 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 TCF24Q7RTU0 167 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 TMEM183AQ8IXX5 376 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 C15orf54Q8N8G6 183 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 OSTCQ9NRP0 149 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
NR1I3-216ENST00000502848 FN1P02751 2386 aaKnown RBP6.86□□□□□ -1.31
NR1I3-216ENST00000502848 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 H3BTX0 84 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 H7BYZ3 331 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 DNASE2O00115 360 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-216ENST00000502848 IGLV2-11P01706 119 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 IGLV2-8P01709 118 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 SLURP1P55000 103 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 SNRPD3P62318 126 aaKnown RBP6.86□□□□□ -1.31
NR1I3-216ENST00000502848 GNG5P63218 68 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 DCANP1Q8TF63 244 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 NDFIP1Q9BT67 221 aa6.86□□□□□ -1.31
NR1I3-216ENST00000502848 TRAV8-2A0A0B4J237 113 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 IGHV3-66A0A0C4DH42 116 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 A6NJY4 79 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 K7EN84 100 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 K7EQG2 157 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 M0R3E3 92 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 CSN3P07498 182 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 S100PP25815 95 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 DEFB136Q30KP8 78 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 RNF212Q495C1 297 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 OR4B1Q8NGF8 309 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 DLX4Q92988 240 aaPredicted RBP6.85□□□□□ -1.31
NR1I3-216ENST00000502848 LINC00477Q96M19 166 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 ODF3Q96PU9 254 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 SPAG8Q99932 426 aaPredicted RBP6.85□□□□□ -1.31
NR1I3-216ENST00000502848 CITED1Q99966 193 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 PSG8Q9UQ74 426 aa6.85□□□□□ -1.31
NR1I3-216ENST00000502848 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 IGHV3-49A0A0A0MS15 119 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 FAM231BA6NCW3 169 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 OR4C46A6NHA9 309 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 ZNF138P52744 262 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
NR1I3-216ENST00000502848 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.31
NR1I3-216ENST00000502848 IBA57Q5T440 356 aaKnown RBP6.84□□□□□ -1.31
NR1I3-216ENST00000502848 TMEM78Q5T7P6 136 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 KCNIP4Q6PIL6 250 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 OR10J6PQ8NGY7 276 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 YPEL4Q96NS1 127 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 MS4A6AQ9H2W1 248 aa6.84□□□□□ -1.31
NR1I3-216ENST00000502848 F8P00451 2351 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 TRAV34A0A0B4J273 112 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 SCO1O75880 301 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
NR1I3-216ENST00000502848 INSL3P51460 131 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 RPL11P62913 178 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms