RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
AP004609.1-201ENST00000498872 RHOGP84095 191 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 ZNF502Q8TBZ5 544 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 TMEM190Q8WZ59 177 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 PGPA6NDG6 321 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 OR2T8A6NH00 312 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 SLC25A5P05141 298 aaKnown RBP12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 S100A6P06703 90 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 USF2Q15853 346 aaPredicted RBP12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 C15orf32Q32M92 178 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 SRD5A3Q9H8P0 318 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 EPDR1Q9UM22 224 aa12.95□□□□□ -0.34
AP004609.1-201ENST00000498872 A0A1W2PPQ1 181 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 GCGP01275 180 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 IGLV2-8P01709 118 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 CTSGP08311 255 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 BPIFA4PQ86YQ2 179 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 C5orf17Q8NAS9 161 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 BTF3L4Q96K17 158 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 Q9H3A6 140 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 ZNF586Q9NXT0 402 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 GAR1Q9NY12 217 aaKnown RBP12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 RNF24Q9Y225 148 aa12.94□□□□□ -0.34
AP004609.1-201ENST00000498872 C5orf52A6NGY3 159 aa12.93□□□□□ -0.34
AP004609.1-201ENST00000498872 TRGC2P03986 189 aa12.93□□□□□ -0.34
AP004609.1-201ENST00000498872 SBSPONQ8IVN8 264 aa12.93□□□□□ -0.34
AP004609.1-201ENST00000498872 ZNF98A6NK75 572 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 PPP5D1E7EU14 171 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 TYMSP04818 313 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 IGLC2P0DOY2 106 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 ADMP35318 185 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 SNRPEP62304 92 aaKnown RBP12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 GNG5P63218 68 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 TMEM183BQ1AE95 376 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 ATG101Q9BSB4 218 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 RYR3Q15413 4870 aa12.92□□□□□ -0.34
AP004609.1-201ENST00000498872 H3BTX0 84 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 MRPS12O15235 138 aaKnown RBP12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 OR5I1Q13606 314 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 EEF1AKMT3Q96AZ1 226 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 LINC00479Q96M42 142 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 OSTCQ9NRP0 149 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 IL36BQ9NZH7 164 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 KLF12Q9Y4X4 402 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 TRBV19A0A075B6N1 114 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 PHOX2AO14813 284 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 S100A9P06702 114 aaKnown RBP12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 FRMD6-AS1P0C7T7 363 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 GPR183P32249 361 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 FAM3BP58499 235 aaPredicted RBP12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 SMUG1Q53HV7 270 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 V9GYV3 84 aa12.91□□□□□ -0.34
AP004609.1-201ENST00000498872 STAB2Q8WWQ8 2551 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 TRAV9-1A0A075B6T8 112 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 TRBV7-1A0A0A6YYK4 115 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 TRAV34A0A0B4J273 112 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 UBE2CO00762 179 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 ISLRO14498 428 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 TRBV12-3P01733 135 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 TCRAP04437 139 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 S100A7P31151 101 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 UBE2G1P62253 170 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 BAGE2Q86Y30 109 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 CCDC140Q96MF4 163 aa12.9□□□□□ -0.34
AP004609.1-201ENST00000498872 A0A0G2JLM5 398 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 H3BUA1 57 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 SLC17A3O00476 420 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 MGST1P10620 155 aaKnown RBP12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 SMIM12Q96EX1 92 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 FMC1Q96HJ9 113 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 ZNF414Q96IQ9 312 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 ATP6V0BQ99437 205 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 HUWE1Q7Z6Z7 4374 aaKnown RBP12.89□□□□□ -0.35
AP004609.1-201ENST00000498872 BMPR1BO00238 502 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 BRI3O95415 125 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 CLEC3BP05452 202 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 FRZBQ92765 325 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
AP004609.1-201ENST00000498872 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms