RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 MRPL53Q96EL3 112 aaKnown RBP11.38□□□□□ -0.59
CPNE1-228ENST00000498814 ZNF471Q9BX82 626 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-228ENST00000498814 ACTR3CQ9C0K3 210 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-228ENST00000498814 PRELID1Q9Y255 219 aa11.38□□□□□ -0.59
CPNE1-228ENST00000498814 ZNF705FA8MVS1 300 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-228ENST00000498814 EIF3GO75821 320 aaKnown RBP eCLIP11.37□□□□□ -0.59
CPNE1-228ENST00000498814 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
CPNE1-228ENST00000498814 STAG3L2P0CL84 134 aa11.37□□□□□ -0.59
CPNE1-228ENST00000498814 STAG3L3P0CL85 134 aa11.37□□□□□ -0.59
CPNE1-228ENST00000498814 CNN1P51911 297 aaKnown RBP11.37□□□□□ -0.59
CPNE1-228ENST00000498814 C1QTNF4Q9BXJ3 329 aa11.37□□□□□ -0.59
CPNE1-228ENST00000498814 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
CPNE1-228ENST00000498814 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
CPNE1-228ENST00000498814 ZNF705DP0CH99 300 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-228ENST00000498814 ZNF705BP0CI00 300 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-228ENST00000498814 AKR1C8PQ5T2L2 129 aa11.36□□□□□ -0.59
CPNE1-228ENST00000498814 AMTNQ6UX39 209 aa11.36□□□□□ -0.59
CPNE1-228ENST00000498814 BAP18Q8IXM2 172 aa11.36□□□□□ -0.59
CPNE1-228ENST00000498814 LYPD1Q8N2G4 141 aa11.36□□□□□ -0.59
CPNE1-228ENST00000498814 CSNK1G2-AS1Q8NCQ2 148 aa11.36□□□□□ -0.59
CPNE1-228ENST00000498814 PHYHIPLQ96FC7 376 aa11.36□□□□□ -0.59
CPNE1-228ENST00000498814 HMGB3O15347 200 aaKnown RBP11.35□□□□□ -0.59
CPNE1-228ENST00000498814 ARL14EPLP0DKL9 152 aa11.35□□□□□ -0.59
CPNE1-228ENST00000498814 TPT1P13693 172 aaKnown RBP11.35□□□□□ -0.59
CPNE1-228ENST00000498814 HIST1H1AQ02539 215 aaPredicted RBP11.35□□□□□ -0.59
CPNE1-228ENST00000498814 ICAM4Q14773 271 aa11.35□□□□□ -0.59
CPNE1-228ENST00000498814 ZFP69Q49AA0 526 aa11.35□□□□□ -0.59
CPNE1-228ENST00000498814 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
CPNE1-228ENST00000498814 STOML3Q8TAV4 291 aa11.35□□□□□ -0.59
CPNE1-228ENST00000498814 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 M0R3E3 92 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 RANP62826 216 aaKnown RBP11.34□□□□□ -0.59
CPNE1-228ENST00000498814 ZNF726P1Q15940 193 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 SUN5Q8TC36 379 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 SLC35B3Q9H1N7 401 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 XCL2Q9UBD3 114 aa11.34□□□□□ -0.59
CPNE1-228ENST00000498814 UMAD1C9J7I0 102 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 CXorf1O96002 111 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 AMBPP02760 352 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 GCHFRP30047 84 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 FXYD7P58549 80 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 C9orf62Q8N4C0 152 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 WWC2-AS2Q96NR7 200 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 RARRES2Q99969 163 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 Q9H3A6 140 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 EDA2RQ9HAV5 297 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
CPNE1-228ENST00000498814 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
CPNE1-228ENST00000498814 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-228ENST00000498814 OR11H2Q8NH07 326 aa11.32□□□□□ -0.6
CPNE1-228ENST00000498814 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
CPNE1-228ENST00000498814 ZNF705EA8MWA4 302 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-228ENST00000498814 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
CPNE1-228ENST00000498814 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
CPNE1-228ENST00000498814 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
CPNE1-228ENST00000498814 CSN1S1P47710 185 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 SPINK13Q1W4C9 94 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 FAM74A1Q5RGS3 127 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 EIF5AL1Q6IS14 154 aaKnown RBP11.3□□□□□ -0.6
CPNE1-228ENST00000498814 DPPA3Q6W0C5 159 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 RXFP4Q8TDU9 374 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 LINC00477Q96M19 166 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 ODF3Q96PU9 254 aa11.3□□□□□ -0.6
CPNE1-228ENST00000498814 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
CPNE1-228ENST00000498814 PGPA6NDG6 321 aa11.29□□□□□ -0.6
CPNE1-228ENST00000498814 M0R2Z0 102 aa11.29□□□□□ -0.6
CPNE1-228ENST00000498814 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-228ENST00000498814 FHITP49789 147 aa11.29□□□□□ -0.6
CPNE1-228ENST00000498814 ZNF705AQ6ZN79 300 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-228ENST00000498814 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
CPNE1-228ENST00000498814 X6R8D5 127 aa11.29□□□□□ -0.6
CPNE1-228ENST00000498814 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 SLC25A5P05141 298 aaKnown RBP11.28□□□□□ -0.6
CPNE1-228ENST00000498814 CT45A10P0DMU9 189 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 TSPOP30536 169 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 CDKN1BP46527 198 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 ERCC8Q13216 396 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 MBD3L1Q8WWY6 194 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
CPNE1-228ENST00000498814 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-228ENST00000498814 DIRC3C9JPN6 131 aa11.27□□□□□ -0.61
CPNE1-228ENST00000498814 INSP01308 110 aa11.27□□□□□ -0.61
CPNE1-228ENST00000498814 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-228ENST00000498814 MIFP14174 115 aa11.27□□□□□ -0.61
CPNE1-228ENST00000498814 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-228ENST00000498814 IQCF2Q8IXL9 164 aa11.27□□□□□ -0.61
CPNE1-228ENST00000498814 NEU1Q99519 415 aa11.27□□□□□ -0.61
CPNE1-228ENST00000498814 VGLL1Q99990 258 aa11.27□□□□□ -0.61
CPNE1-228ENST00000498814 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms