RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 POLEQ07864 2286 aa11.9□□□□□ -0.5
MACF1-223ENST00000496360 IGKV1-16P04430 117 aa11.9□□□□□ -0.51
MACF1-223ENST00000496360 IGHV1-2P23083 117 aa11.9□□□□□ -0.51
MACF1-223ENST00000496360 PRNTQ86SH4 94 aa11.9□□□□□ -0.51
MACF1-223ENST00000496360 SLC25A39Q9BZJ4 359 aaPredicted RBP11.9□□□□□ -0.51
MACF1-223ENST00000496360 NHP2Q9NX24 153 aaKnown RBP11.9□□□□□ -0.51
MACF1-223ENST00000496360 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.51
MACF1-223ENST00000496360 SETXQ7Z333 2677 aaKnown RBP11.89□□□□□ -0.51
MACF1-223ENST00000496360 ATP5LO75964 103 aa11.89□□□□□ -0.51
MACF1-223ENST00000496360 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
MACF1-223ENST00000496360 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
MACF1-223ENST00000496360 PRO0461Q9UI25 63 aa11.89□□□□□ -0.51
MACF1-223ENST00000496360 TRBV25-1A0A075B6N4 114 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 PLAUP00749 431 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 HOXA4Q00056 320 aaPredicted RBP11.88□□□□□ -0.51
MACF1-223ENST00000496360 ETDBQ3ZM63 59 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 KLF17Q5JT82 389 aaPredicted RBP11.88□□□□□ -0.51
MACF1-223ENST00000496360 C8orf86Q6ZUL3 223 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 HIGD1AQ9Y241 93 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 FAM106CPP0CH98 169 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 WT1-ASQ06250 92 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 C3AR1Q16581 482 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 ZNRF1Q8ND25 227 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 MDS2Q8NDY4 140 aa11.88□□□□□ -0.51
MACF1-223ENST00000496360 SPTAN1Q13813 2472 aaKnown RBP11.87□□□□□ -0.51
MACF1-223ENST00000496360 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 WI2-2373I1.2A0A1W2PRP0 233 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 IGKCP01834 107 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 RRN3P1Q2M238 152 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 Q6ZT83 130 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
MACF1-223ENST00000496360 HHLA3Q9XRX5 114 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 ZGRF1Q86YA3 2104 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
MACF1-223ENST00000496360 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 NPIPB5A8MRT5 1133 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 LHBP01229 141 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 ODF1Q14990 250 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 TWIST1Q15672 202 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 C12orf74Q32Q52 190 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 LINC00312Q9Y6C7 94 aa11.87□□□□□ -0.51
MACF1-223ENST00000496360 USP9YO00507 2555 aaPredicted RBP11.86□□□□□ -0.51
MACF1-223ENST00000496360 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
MACF1-223ENST00000496360 FCER1GP30273 86 aa11.86□□□□□ -0.51
MACF1-223ENST00000496360 NXT2Q9NPJ8 142 aaKnown RBP11.86□□□□□ -0.51
MACF1-223ENST00000496360 DKK2Q9UBU2 259 aa11.86□□□□□ -0.51
MACF1-223ENST00000496360 H3BMG7 143 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 DPM2O94777 84 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 MRPL51Q4U2R6 128 aaKnown RBP11.85□□□□□ -0.51
MACF1-223ENST00000496360 TM4SF20Q53R12 229 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 TMEM178AQ8NBL3 297 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 HES7Q9BYE0 225 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 PSG8Q9UQ74 426 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 K7ERJ3 54 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 APOMO95445 188 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 FOXI1Q12951 378 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 SH2D6Q7Z4S9 175 aa11.85□□□□□ -0.51
MACF1-223ENST00000496360 DYSFO75923 2080 aa11.84□□□□□ -0.51
MACF1-223ENST00000496360 CGB1A6NKQ9 187 aa11.84□□□□□ -0.51
MACF1-223ENST00000496360 IGLV1-44P01699 117 aa11.84□□□□□ -0.51
MACF1-223ENST00000496360 CKS2P33552 79 aa11.84□□□□□ -0.51
MACF1-223ENST00000496360 UTF1Q5T230 341 aa11.84□□□□□ -0.51
MACF1-223ENST00000496360 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
MACF1-223ENST00000496360 COL12A1Q99715 3063 aa11.84□□□□□ -0.51
MACF1-223ENST00000496360 TRAV8-1A0A0A6YYK1 113 aa11.83□□□□□ -0.51
MACF1-223ENST00000496360 LYZL6O75951 148 aa11.83□□□□□ -0.51
MACF1-223ENST00000496360 MEOX1P50221 254 aa11.83□□□□□ -0.51
MACF1-223ENST00000496360 PLGLAQ15195 96 aa11.83□□□□□ -0.51
MACF1-223ENST00000496360 VMA21Q3ZAQ7 101 aa11.83□□□□□ -0.51
MACF1-223ENST00000496360 COX8CQ7Z4L0 72 aa11.83□□□□□ -0.51
MACF1-223ENST00000496360 FAM169BQ8N8A8 192 aa11.83□□□□□ -0.51
MACF1-223ENST00000496360 MRPL36Q9P0J6 103 aaKnown RBP11.83□□□□□ -0.51
MACF1-223ENST00000496360 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
MACF1-223ENST00000496360 IGHV3OR15-7A0A075B7D8 119 aa11.83□□□□□ -0.52
MACF1-223ENST00000496360 IGKV2D-26A0A0A0MRZ7 120 aa11.83□□□□□ -0.52
MACF1-223ENST00000496360 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
MACF1-223ENST00000496360 LYZL1Q6UWQ5 148 aa11.83□□□□□ -0.52
MACF1-223ENST00000496360 AMN1Q8IY45 258 aa11.83□□□□□ -0.52
MACF1-223ENST00000496360 PSMG3-AS1Q96PY0 264 aa11.83□□□□□ -0.52
MACF1-223ENST00000496360 MRPL20Q9BYC9 149 aaKnown RBP11.83□□□□□ -0.52
MACF1-223ENST00000496360 CECR9P0C854 216 aa11.82□□□□□ -0.52
MACF1-223ENST00000496360 LYRM7Q5U5X0 104 aa11.82□□□□□ -0.52
MACF1-223ENST00000496360 GFRALQ6UXV0 394 aa11.82□□□□□ -0.52
MACF1-223ENST00000496360 DOPEY1Q5JWR5 2465 aa11.82□□□□□ -0.52
MACF1-223ENST00000496360 TRBV19A0A075B6N1 114 aa11.82□□□□□ -0.52
MACF1-223ENST00000496360 GATA4P43694 442 aa11.82□□□□□ -0.52
MACF1-223ENST00000496360 SRSF2Q01130 221 aaKnown RBP11.82□□□□□ -0.52
MACF1-223ENST00000496360 C8orf31Q8N9H6 132 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms