RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 ZNF503Q96F45 646 aa14.65□□□□□ -0.06
LMO4-204ENST00000495705 HIST1H1AQ02539 215 aaPredicted RBP14.64□□□□□ -0.07
LMO4-204ENST00000495705 TMUB2Q71RG4 321 aa14.64□□□□□ -0.07
LMO4-204ENST00000495705 HYLS1Q96M11 299 aa14.64□□□□□ -0.07
LMO4-204ENST00000495705 ZNF471Q9BX82 626 aaPredicted RBP14.64□□□□□ -0.07
LMO4-204ENST00000495705 ACTR3CQ9C0K3 210 aaPredicted RBP14.64□□□□□ -0.07
LMO4-204ENST00000495705 ZNF705FA8MVS1 300 aaPredicted RBP14.63□□□□□ -0.07
LMO4-204ENST00000495705 AKR1C8PQ5T2L2 129 aa14.63□□□□□ -0.07
LMO4-204ENST00000495705 LYPD1Q8N2G4 141 aa14.63□□□□□ -0.07
LMO4-204ENST00000495705 A0A1B0GVG6 124 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 ZNF705DP0CH99 300 aaPredicted RBP14.62□□□□□ -0.07
LMO4-204ENST00000495705 ZNF705BP0CI00 300 aaPredicted RBP14.62□□□□□ -0.07
LMO4-204ENST00000495705 STAG3L2P0CL84 134 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 STAG3L3P0CL85 134 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 AMTNQ6UX39 209 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 OR10J6PQ8NGY7 276 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 RAB24Q969Q5 203 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 PHYHIPLQ96FC7 376 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 RARRES2Q99969 163 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 EDA2RQ9HAV5 297 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 XCL2Q9UBD3 114 aa14.62□□□□□ -0.07
LMO4-204ENST00000495705 HMGB3O15347 200 aaKnown RBP14.61□□□□□ -0.07
LMO4-204ENST00000495705 EIF3GO75821 320 aaKnown RBP eCLIP14.61□□□□□ -0.07
LMO4-204ENST00000495705 AMBPP02760 352 aa14.61□□□□□ -0.07
LMO4-204ENST00000495705 SEC11BP0C7V7 166 aa14.61□□□□□ -0.07
LMO4-204ENST00000495705 ARL14EPLP0DKL9 152 aa14.61□□□□□ -0.07
LMO4-204ENST00000495705 EXOC3-AS1Q8N2X6 119 aa14.61□□□□□ -0.07
LMO4-204ENST00000495705 CSNK1G2-AS1Q8NCQ2 148 aa14.61□□□□□ -0.07
LMO4-204ENST00000495705 SLC35B3Q9H1N7 401 aa14.61□□□□□ -0.07
LMO4-204ENST00000495705 M0R3E3 92 aa14.6□□□□□ -0.07
LMO4-204ENST00000495705 TPT1P13693 172 aaKnown RBP14.6□□□□□ -0.07
LMO4-204ENST00000495705 ICAM4Q14773 271 aa14.6□□□□□ -0.07
LMO4-204ENST00000495705 LGALSLQ3ZCW2 172 aaPredicted RBP14.6□□□□□ -0.07
LMO4-204ENST00000495705 OR11H2Q8NH07 326 aa14.6□□□□□ -0.07
LMO4-204ENST00000495705 PPP1R14DQ9NXH3 145 aa14.6□□□□□ -0.07
LMO4-204ENST00000495705 CTXND1A0A1B0GTU2 59 aa14.59□□□□□ -0.07
LMO4-204ENST00000495705 PRAC2D3DTV9 90 aa14.59□□□□□ -0.07
LMO4-204ENST00000495705 BOLA2-SMG1P6H3BVE0 249 aa14.59□□□□□ -0.07
LMO4-204ENST00000495705 CXorf1O96002 111 aa14.59□□□□□ -0.07
LMO4-204ENST00000495705 FXYD7P58549 80 aa14.59□□□□□ -0.07
LMO4-204ENST00000495705 BAP18Q8IXM2 172 aa14.59□□□□□ -0.07
LMO4-204ENST00000495705 Q9H3A6 140 aa14.59□□□□□ -0.07
LMO4-204ENST00000495705 ZNF705EA8MWA4 302 aaPredicted RBP14.58□□□□□ -0.08
LMO4-204ENST00000495705 RANP62826 216 aaKnown RBP14.58□□□□□ -0.08
LMO4-204ENST00000495705 ZFP69Q49AA0 526 aa14.58□□□□□ -0.08
LMO4-204ENST00000495705 STOML3Q8TAV4 291 aa14.58□□□□□ -0.08
LMO4-204ENST00000495705 UMAD1C9J7I0 102 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 NPIPB6E9PJ23 425 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 GCHFRP30047 84 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 CSN1S1P47710 185 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 CD300CQ08708 224 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 FAM74A1Q5RGS3 127 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 IGF2BP2-AS1Q96M15 143 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 TMEM167BQ9NRX6 74 aa14.57□□□□□ -0.08
LMO4-204ENST00000495705 PRB4P10163 310 aaPredicted RBP14.56□□□□□ -0.08
LMO4-204ENST00000495705 ZNF726P1Q15940 193 aa14.56□□□□□ -0.08
LMO4-204ENST00000495705 SPINK13Q1W4C9 94 aa14.56□□□□□ -0.08
LMO4-204ENST00000495705 SSX7Q7RTT5 188 aa14.56□□□□□ -0.08
LMO4-204ENST00000495705 SUN5Q8TC36 379 aa14.56□□□□□ -0.08
LMO4-204ENST00000495705 ODF3Q96PU9 254 aa14.56□□□□□ -0.08
LMO4-204ENST00000495705 OTORQ9NRC9 128 aa14.56□□□□□ -0.08
LMO4-204ENST00000495705 A0A0J9YWU9 116 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 M0R2Z0 102 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 INSP01308 110 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 MIFP14174 115 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 TSPOP30536 169 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 CDKN1BP46527 198 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 ZNF705AQ6ZN79 300 aaPredicted RBP14.55□□□□□ -0.08
LMO4-204ENST00000495705 RXFP4Q8TDU9 374 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 C11orf68Q9H3H3 251 aaKnown RBP14.55□□□□□ -0.08
LMO4-204ENST00000495705 GOLT1BQ9Y3E0 138 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 X6R8D5 127 aa14.55□□□□□ -0.08
LMO4-204ENST00000495705 EIF5AL1Q6IS14 154 aaKnown RBP14.54□□□□□ -0.08
LMO4-204ENST00000495705 ARL6IP6Q8N6S5 226 aa14.54□□□□□ -0.08
LMO4-204ENST00000495705 CMTM2Q8TAZ6 248 aa14.54□□□□□ -0.08
LMO4-204ENST00000495705 LINC00477Q96M19 166 aa14.54□□□□□ -0.08
LMO4-204ENST00000495705 NEU1Q99519 415 aa14.54□□□□□ -0.08
LMO4-204ENST00000495705 RBAKDNA6NC62 111 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 MAP1LC3B2A6NCE7 125 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 CRXO43186 299 aaPredicted RBP14.53□□□□□ -0.08
LMO4-204ENST00000495705 DPPA3Q6W0C5 159 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 C9orf47Q6ZRZ4 202 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 SLC51BQ86UW2 128 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 IQCF2Q8IXL9 164 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 C9orf62Q8N4C0 152 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 TMED6Q8WW62 240 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 MAP1LC3BQ9GZQ8 125 aa14.53□□□□□ -0.08
LMO4-204ENST00000495705 IGKV2-40A0A087WW87 121 aaPredicted RBP14.52□□□□□ -0.09
LMO4-204ENST00000495705 PGPA6NDG6 321 aa14.52□□□□□ -0.09
LMO4-204ENST00000495705 IGKV2D-40P01614 121 aaPredicted RBP14.52□□□□□ -0.09
LMO4-204ENST00000495705 SLC25A5P05141 298 aaKnown RBP14.52□□□□□ -0.09
LMO4-204ENST00000495705 LEPP41159 167 aa14.52□□□□□ -0.09
LMO4-204ENST00000495705 TMEM78Q5T7P6 136 aa14.52□□□□□ -0.09
LMO4-204ENST00000495705 Q8NAQ8 132 aa14.52□□□□□ -0.09
LMO4-204ENST00000495705 IL17DQ8TAD2 202 aa14.52□□□□□ -0.09
LMO4-204ENST00000495705 MUC7Q8TAX7 377 aa14.52□□□□□ -0.09
LMO4-204ENST00000495705 IGHV3OR16-12A0A075B7B8 117 aa14.51□□□□□ -0.09
LMO4-204ENST00000495705 IGHV4-28A0A0C4DH34 117 aa14.51□□□□□ -0.09
LMO4-204ENST00000495705 SMIM9A6NGZ8 99 aa14.51□□□□□ -0.09
LMO4-204ENST00000495705 CT45A10P0DMU9 189 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms