RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RAB24Q969Q5 203 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 PHYHIPLQ96FC7 376 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 SLC35B3Q9H1N7 401 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 XCL2Q9UBD3 114 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 TENM3Q9P273 2699 aa14.19□□□□□ -0.14
HDAC4-212ENST00000495497 M0R3E3 92 aa14.18□□□□□ -0.14
HDAC4-212ENST00000495497 PFDN1O60925 122 aa14.18□□□□□ -0.14
HDAC4-212ENST00000495497 PSG9Q00887 426 aa14.18□□□□□ -0.14
HDAC4-212ENST00000495497 PDE6HQ13956 83 aa14.18□□□□□ -0.14
HDAC4-212ENST00000495497 OR8A1Q8NGG7 326 aa14.18□□□□□ -0.14
HDAC4-212ENST00000495497 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
HDAC4-212ENST00000495497 DUSP14O95147 198 aaKnown RBP14.17□□□□□ -0.14
HDAC4-212ENST00000495497 NUTF2P61970 127 aaKnown RBP14.17□□□□□ -0.14
HDAC4-212ENST00000495497 ICAM4Q14773 271 aa14.17□□□□□ -0.14
HDAC4-212ENST00000495497 PLA2G2EQ9NZK7 142 aa14.17□□□□□ -0.14
HDAC4-212ENST00000495497 STAG3L2P0CL84 134 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 STAG3L3P0CL85 134 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 ARL14EPLP0DKL9 152 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 RANP62826 216 aaKnown RBP14.16□□□□□ -0.14
HDAC4-212ENST00000495497 ZNF726P1Q15940 193 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 AKR1C8PQ5T2L2 129 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 AMTNQ6UX39 209 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 CSNK1G2-AS1Q8NCQ2 148 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 CLUHP3Q96NS8 147 aa14.16□□□□□ -0.14
HDAC4-212ENST00000495497 ACTR3CQ9C0K3 210 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-212ENST00000495497 A8MTW9 85 aa14.15□□□□□ -0.14
HDAC4-212ENST00000495497 PQLC2Q6ZP29 291 aa14.15□□□□□ -0.14
HDAC4-212ENST00000495497 HYLS1Q96M11 299 aa14.15□□□□□ -0.14
HDAC4-212ENST00000495497 RARRES2Q99969 163 aa14.15□□□□□ -0.14
HDAC4-212ENST00000495497 OR11H2Q8NH07 326 aa14.14□□□□□ -0.15
HDAC4-212ENST00000495497 Q9H3A6 140 aa14.14□□□□□ -0.15
HDAC4-212ENST00000495497 AAMDCQ9H7C9 122 aa14.14□□□□□ -0.15
HDAC4-212ENST00000495497 EDA2RQ9HAV5 297 aa14.14□□□□□ -0.15
HDAC4-212ENST00000495497 M0R2Z0 102 aa14.13□□□□□ -0.15
HDAC4-212ENST00000495497 SPINK13Q1W4C9 94 aa14.13□□□□□ -0.15
HDAC4-212ENST00000495497 OR10J6PQ8NGY7 276 aa14.13□□□□□ -0.15
HDAC4-212ENST00000495497 MRPL53Q96EL3 112 aaKnown RBP14.13□□□□□ -0.15
HDAC4-212ENST00000495497 WWC2-AS2Q96NR7 200 aa14.13□□□□□ -0.15
HDAC4-212ENST00000495497 PRELID1Q9Y255 219 aa14.13□□□□□ -0.15
HDAC4-212ENST00000495497 GCHFRP30047 84 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 FHITP49789 147 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 ERCC8Q13216 396 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 ZFP69Q49AA0 526 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 BAP18Q8IXM2 172 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 C9orf62Q8N4C0 152 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 C1QTNF4Q9BXJ3 329 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 PPP1R14DQ9NXH3 145 aa14.12□□□□□ -0.15
HDAC4-212ENST00000495497 A0A0J9YWU9 116 aa14.11□□□□□ -0.15
HDAC4-212ENST00000495497 CTXND1A0A1B0GTU2 59 aa14.11□□□□□ -0.15
HDAC4-212ENST00000495497 SEC11BP0C7V7 166 aa14.11□□□□□ -0.15
HDAC4-212ENST00000495497 TPT1P13693 172 aaKnown RBP14.11□□□□□ -0.15
HDAC4-212ENST00000495497 FGF8P55075 233 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-212ENST00000495497 IQCF2Q8IXL9 164 aa14.11□□□□□ -0.15
HDAC4-212ENST00000495497 TRAV12-2A0A075B6T6 113 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 IGHV3OR16-12A0A075B7B8 117 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 IGKV2-40A0A087WW87 121 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-212ENST00000495497 NPIPB6E9PJ23 425 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 BOLA2-SMG1P6H3BVE0 249 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 CXorf1O96002 111 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 IGKV2D-40P01614 121 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-212ENST00000495497 CT45A10P0DMU9 189 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 NKX2-5P52952 324 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-212ENST00000495497 EIF5AP63241 154 aaKnown RBP14.1□□□□□ -0.15
HDAC4-212ENST00000495497 LYPD1Q8N2G4 141 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 TMED6Q8WW62 240 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 TMPRSS5Q9H3S3 457 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 X6R8D5 127 aa14.1□□□□□ -0.15
HDAC4-212ENST00000495497 PGPA6NDG6 321 aa14.09□□□□□ -0.15
HDAC4-212ENST00000495497 DEFB4AO15263 64 aa14.09□□□□□ -0.15
HDAC4-212ENST00000495497 CRXO43186 299 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-212ENST00000495497 KIR3DS1Q14943 382 aa14.09□□□□□ -0.15
HDAC4-212ENST00000495497 STOML3Q8TAV4 291 aa14.09□□□□□ -0.15
HDAC4-212ENST00000495497 OTORQ9NRC9 128 aa14.09□□□□□ -0.15
HDAC4-212ENST00000495497 STAB2Q8WWQ8 2551 aa14.08□□□□□ -0.16
HDAC4-212ENST00000495497 ZNF705EA8MWA4 302 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-212ENST00000495497 C1orf158Q8N1D5 194 aa14.08□□□□□ -0.16
HDAC4-212ENST00000495497 SUN5Q8TC36 379 aa14.08□□□□□ -0.16
HDAC4-212ENST00000495497 VGLL1Q99990 258 aa14.08□□□□□ -0.16
HDAC4-212ENST00000495497 AGPAT4-IT1Q9H0P7 198 aa14.08□□□□□ -0.16
HDAC4-212ENST00000495497 RPH3ALQ9UNE2 315 aa14.08□□□□□ -0.16
HDAC4-212ENST00000495497 MAP1LC3B2A6NCE7 125 aa14.07□□□□□ -0.16
HDAC4-212ENST00000495497 J3KRW8 73 aa14.07□□□□□ -0.16
HDAC4-212ENST00000495497 FAM213BQ8TBF2 198 aa14.07□□□□□ -0.16
HDAC4-212ENST00000495497 IGF2BP2-AS1Q96M15 143 aa14.07□□□□□ -0.16
HDAC4-212ENST00000495497 MAP1LC3BQ9GZQ8 125 aa14.07□□□□□ -0.16
HDAC4-212ENST00000495497 TMEM167BQ9NRX6 74 aa14.07□□□□□ -0.16
HDAC4-212ENST00000495497 RBMY1A1P0DJD3 496 aaKnown RBP14.06□□□□□ -0.16
HDAC4-212ENST00000495497 RBMY1CP0DJD4 496 aa14.06□□□□□ -0.16
HDAC4-212ENST00000495497 CSN1S1P47710 185 aa14.06□□□□□ -0.16
HDAC4-212ENST00000495497 RBMY1FQ15415 496 aaKnown RBP14.06□□□□□ -0.16
HDAC4-212ENST00000495497 ZNF705AQ6ZN79 300 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-212ENST00000495497 SLC51BQ86UW2 128 aa14.06□□□□□ -0.16
HDAC4-212ENST00000495497 Q8NAQ8 132 aa14.06□□□□□ -0.16
HDAC4-212ENST00000495497 IGHV4-28A0A0C4DH34 117 aa14.05□□□□□ -0.16
HDAC4-212ENST00000495497 UMAD1C9J7I0 102 aa14.05□□□□□ -0.16
HDAC4-212ENST00000495497 DIRC3C9JPN6 131 aa14.05□□□□□ -0.16
HDAC4-212ENST00000495497 INSP01308 110 aa14.05□□□□□ -0.16
HDAC4-212ENST00000495497 AMBPP02760 352 aa14.05□□□□□ -0.16
HDAC4-212ENST00000495497 CDKN1BP46527 198 aa14.05□□□□□ -0.16
HDAC4-212ENST00000495497 GNG5P63218 68 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms