RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 NPCDR1Q9BY65 106 aa8.91□□□□□ -0.98
HSPG2-212ENST00000493940 INSP01308 110 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 CT45A10P0DMU9 189 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 ERCC8Q13216 396 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 RAB31Q13636 194 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 CLINT1Q14677 625 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 MIR17HGQ75NE6 70 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 STX12Q86Y82 276 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 OR1L4Q8NGR5 311 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 PPP1R1CQ8WVI7 109 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 SLC50A1Q9BRV3 221 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 TMEM208Q9BTX3 173 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 SLC25A2Q9BXI2 301 aa8.9□□□□□ -0.98
HSPG2-212ENST00000493940 DYNC1H1Q14204 4646 aaKnown RBP8.89□□□□□ -0.99
HSPG2-212ENST00000493940 TRBV19A0A075B6N1 114 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 E5RGE8 158 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 J3KRW8 73 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 PRAF2O60831 178 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 EIF3GO75821 320 aaKnown RBP eCLIP8.89□□□□□ -0.99
HSPG2-212ENST00000493940 HTN1P15515 57 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 HBG1P69891 147 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 HBG2P69892 147 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 OXA1LQ15070 435 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 GFI1BQ5VTD9 330 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 Q6ZQT7 251 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 EXOC3-AS1Q8N2X6 119 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 LINC01587Q99440 93 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 WFDC1Q9HC57 220 aa8.89□□□□□ -0.99
HSPG2-212ENST00000493940 PCLOQ9Y6V0 5065 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 MPC2O95563 127 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 CDKN1BP46527 198 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 DAD1P61803 113 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 TMEM88Q6PEY1 159 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 S100A7AQ86SG5 101 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 ZNF503Q96F45 646 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 PFDN5Q99471 154 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 NDUFAF3Q9BU61 184 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 WDR61Q9GZS3 305 aaKnown RBP8.88□□□□□ -0.99
HSPG2-212ENST00000493940 DNAH11Q96DT5 4516 aa8.88□□□□□ -0.99
HSPG2-212ENST00000493940 NPIPB6E9PJ23 425 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 RLN2P04090 185 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 DEFB130BP0DP73 79 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 DEFB130AP0DP74 79 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 HIST1H1EP10412 219 aaKnown RBP8.87□□□□□ -0.99
HSPG2-212ENST00000493940 TSPOP30536 169 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 POM121L12Q8N7R1 296 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 RNASE8Q8TDE3 154 aaKnown RBP8.87□□□□□ -0.99
HSPG2-212ENST00000493940 BLNKQ8WV28 456 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 AGPAT4-IT1Q9H0P7 198 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 TMEM14CQ9P0S9 112 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
HSPG2-212ENST00000493940 M0R2N4 97 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 MPDU1O75352 247 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 TAS2R60P59551 318 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 GUK1Q16774 197 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 OR10J6PQ8NGY7 276 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 FAM19A4Q96LR4 140 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 SMIM3Q9BZL3 60 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 SLC25A31Q9H0C2 315 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 RNF24Q9Y225 148 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 HSPB11Q9Y547 144 aa8.86□□□□□ -0.99
HSPG2-212ENST00000493940 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 LYRM9A8MSI8 78 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 SSNA1O43805 119 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 ZNF253O75346 499 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 CYCSP99999 105 aaKnown RBP8.85□□□□□ -0.99
HSPG2-212ENST00000493940 CD300CQ08708 224 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 PRR9Q5T870 116 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 TMEM256Q8N2U0 113 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 FXYD5Q96DB9 178 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 VGLL1Q99990 258 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 NOP10Q9NPE3 64 aaKnown RBP8.85□□□□□ -0.99
HSPG2-212ENST00000493940 MBD2Q9UBB5 411 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 ALG5Q9Y673 324 aa8.85□□□□□ -0.99
HSPG2-212ENST00000493940 IGLV2-18A0A075B6J9 118 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 IGKV2-40A0A087WW87 121 aaPredicted RBP8.84□□□□□ -0.99
HSPG2-212ENST00000493940 TEX48A0A1B0GUV7 120 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 RTL8CO15255 209 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 ZNF324O75467 553 aaPredicted RBP8.84□□□□□ -0.99
HSPG2-212ENST00000493940 IGKV2D-40P01614 121 aaPredicted RBP8.84□□□□□ -0.99
HSPG2-212ENST00000493940 OR10J4P0C629 311 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 NBEAP1P0C6P0 100 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 P0DMU3 169 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 FAM231AP0DMU4 169 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 FAM231CP0DMU5 169 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 RYR1P21817 5038 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 ICAM4Q14773 271 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 Q5BKY6 102 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 PHYHIPLQ96FC7 376 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 OR51M1Q9H341 326 aa8.84□□□□□ -0.99
HSPG2-212ENST00000493940 H7BYZ3 331 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
HSPG2-212ENST00000493940 DEFA1P59665 94 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 DEFA3P59666 94 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 BTN1A1Q13410 526 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 FAM122CQ6P4D5 195 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 LINC00612Q8N6U2 182 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 TMEM263Q8WUH6 116 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms