RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 PGPA6NDG6 321 aa11.68□□□□□ -0.54
HPS4-216ENST00000493455 HBE1P02100 147 aa11.68□□□□□ -0.54
HPS4-216ENST00000493455 BLOC1S1P78537 153 aa11.68□□□□□ -0.54
HPS4-216ENST00000493455 CCL20P78556 96 aa11.68□□□□□ -0.54
HPS4-216ENST00000493455 HIST1H1AQ02539 215 aaPredicted RBP11.68□□□□□ -0.54
HPS4-216ENST00000493455 GDF5OSQ5U4N7 250 aa11.68□□□□□ -0.54
HPS4-216ENST00000493455 EBLN2Q6P2I7 272 aa11.68□□□□□ -0.54
HPS4-216ENST00000493455 STHQ8IWL8 128 aa11.68□□□□□ -0.54
HPS4-216ENST00000493455 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 PRAC2D3DTV9 90 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 SLC25A5P05141 298 aaKnown RBP11.67□□□□□ -0.54
HPS4-216ENST00000493455 GNG5P63218 68 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 CST9LP1Q5W188 147 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 CMTM2Q8TAZ6 248 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 OTORQ9NRC9 128 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 GNG13Q9P2W3 67 aa11.67□□□□□ -0.54
HPS4-216ENST00000493455 YTHDF2Q9Y5A9 579 aaKnown RBP11.67□□□□□ -0.54
HPS4-216ENST00000493455 PAGE4O60829 102 aa11.66□□□□□ -0.54
HPS4-216ENST00000493455 CSN1S1P47710 185 aa11.66□□□□□ -0.54
HPS4-216ENST00000493455 SUMO1P63165 101 aaKnown RBP11.66□□□□□ -0.54
HPS4-216ENST00000493455 FOXI2Q6ZQN5 318 aa11.66□□□□□ -0.54
HPS4-216ENST00000493455 FAM110AQ9BQ89 295 aa11.66□□□□□ -0.54
HPS4-216ENST00000493455 SAV1Q9H4B6 383 aaPredicted RBP11.66□□□□□ -0.54
HPS4-216ENST00000493455 IGKV2-40A0A087WW87 121 aaPredicted RBP11.65□□□□□ -0.54
HPS4-216ENST00000493455 IGKV2D-40P01614 121 aaPredicted RBP11.65□□□□□ -0.54
HPS4-216ENST00000493455 LYPD1Q8N2G4 141 aa11.65□□□□□ -0.54
HPS4-216ENST00000493455 SUN5Q8TC36 379 aa11.65□□□□□ -0.54
HPS4-216ENST00000493455 CLEC5AQ9NY25 188 aa11.65□□□□□ -0.54
HPS4-216ENST00000493455 PRELID1Q9Y255 219 aa11.65□□□□□ -0.54
HPS4-216ENST00000493455 A0A0J9YX75 114 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 FAM74A7A6NL05 159 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 GGTLC3B5MD39 225 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 FRMD6-AS1P0C7T7 363 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 ATP5G3P48201 142 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 FXYD7P58549 80 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 ERCC8Q13216 396 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 HAGHQ16775 308 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 OR8A1Q8NGG7 326 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 PPP1R14DQ9NXH3 145 aa11.64□□□□□ -0.55
HPS4-216ENST00000493455 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
HPS4-216ENST00000493455 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
HPS4-216ENST00000493455 A0A1W2PRE2 83 aa11.63□□□□□ -0.55
HPS4-216ENST00000493455 RBMY1BA6NDE4 496 aaKnown RBP11.63□□□□□ -0.55
HPS4-216ENST00000493455 RBMY1EA6NEQ0 496 aaKnown RBP11.63□□□□□ -0.55
HPS4-216ENST00000493455 IFNA1P01562 189 aa11.63□□□□□ -0.55
HPS4-216ENST00000493455 RBMY1DP0C7P1 496 aaKnown RBP11.63□□□□□ -0.55
HPS4-216ENST00000493455 HLA-DRB4P13762 266 aa11.63□□□□□ -0.55
HPS4-216ENST00000493455 PPT1P50897 306 aa11.63□□□□□ -0.55
HPS4-216ENST00000493455 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
HPS4-216ENST00000493455 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
HPS4-216ENST00000493455 MRPL53Q96EL3 112 aaKnown RBP11.63□□□□□ -0.55
HPS4-216ENST00000493455 HLA-DRB4X5D2U9 266 aa11.63□□□□□ -0.55
HPS4-216ENST00000493455 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 H3BMM0 161 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 DUSP14O95147 198 aaKnown RBP11.62□□□□□ -0.55
HPS4-216ENST00000493455 IFITM2Q01629 132 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 TRPT1Q86TN4 253 aaKnown RBP11.62□□□□□ -0.55
HPS4-216ENST00000493455 C5orf17Q8NAS9 161 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 RXFP4Q8TDU9 374 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 SGK494Q96LW2 274 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 ASCL2Q99929 193 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 MANBALQ9NQG1 85 aa11.62□□□□□ -0.55
HPS4-216ENST00000493455 DIRC3C9JPN6 131 aa11.61□□□□□ -0.55
HPS4-216ENST00000493455 J3KRW8 73 aa11.61□□□□□ -0.55
HPS4-216ENST00000493455 RAB14P61106 215 aa11.61□□□□□ -0.55
HPS4-216ENST00000493455 VGLL1Q99990 258 aa11.61□□□□□ -0.55
HPS4-216ENST00000493455 C11orf94C9JXX5 98 aa11.6□□□□□ -0.55
HPS4-216ENST00000493455 TMEM78Q5T7P6 136 aa11.6□□□□□ -0.55
HPS4-216ENST00000493455 ZNF767PQ75MW2 155 aa11.6□□□□□ -0.55
HPS4-216ENST00000493455 SLC35B3Q9H1N7 401 aa11.6□□□□□ -0.55
HPS4-216ENST00000493455 EPDR1Q9UM22 224 aa11.6□□□□□ -0.55
HPS4-216ENST00000493455 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
HPS4-216ENST00000493455 TCRAP04437 139 aa11.59□□□□□ -0.55
HPS4-216ENST00000493455 NMBP08949 121 aa11.59□□□□□ -0.55
HPS4-216ENST00000493455 BCL2P10415 239 aa11.59□□□□□ -0.55
HPS4-216ENST00000493455 APOC4P55056 127 aa11.59□□□□□ -0.55
HPS4-216ENST00000493455 Q8TAT8 98 aa11.59□□□□□ -0.55
HPS4-216ENST00000493455 NKX6-2Q9C056 277 aaPredicted RBP11.59□□□□□ -0.55
HPS4-216ENST00000493455 TRAV8-1A0A0A6YYK1 113 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 K7EQM0 130 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 M0R2Z0 102 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 PEX7O00628 323 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 SPINK13Q1W4C9 94 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 TOR2AQ5JU69 321 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 RARRES2Q99969 163 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 AGPAT4-IT1Q9H0P7 198 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 XCL2Q9UBD3 114 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 ARL2-SNX15V9GYD0 113 aa11.58□□□□□ -0.56
HPS4-216ENST00000493455 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
HPS4-216ENST00000493455 LOC102723971A0A1B0GUV8 181 aa11.57□□□□□ -0.56
HPS4-216ENST00000493455 SCO2A0A1W2PP80 73 aa11.57□□□□□ -0.56
HPS4-216ENST00000493455 A8MZ25 164 aa11.57□□□□□ -0.56
HPS4-216ENST00000493455 AKR1C3P42330 323 aa11.57□□□□□ -0.56
HPS4-216ENST00000493455 NUTF2P61970 127 aaKnown RBP11.57□□□□□ -0.56
HPS4-216ENST00000493455 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
HPS4-216ENST00000493455 ATG101Q9BSB4 218 aa11.57□□□□□ -0.56
HPS4-216ENST00000493455 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms