RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CAMSAP2Q08AD1 1489 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 COL24A1Q17RW2 1714 aa0.78□□□□□ -2.29
CLK1-213ENST00000492793 MAP1LC3B2A6NCE7 125 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 CST7O76096 145 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 MT-ND6P03923 174 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 HBBP68871 147 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 RTL8BQ17RB0 113 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 DCUN1D2Q6PH85 259 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 PHF5AQ7RTV0 110 aaKnown RBP0.77□□□□□ -2.29
CLK1-213ENST00000492793 RTL8AQ9BWD3 113 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 ROCK1Q13464 1354 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 NCAPD3P42695 1498 aa0.77□□□□□ -2.29
CLK1-213ENST00000492793 CD109Q6YHK3 1445 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 TRAV5A0A0B4J249 113 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 PGRMC1O00264 195 aaKnown RBP0.76□□□□□ -2.29
CLK1-213ENST00000492793 RPL35P42766 123 aaKnown RBP0.76□□□□□ -2.29
CLK1-213ENST00000492793 VMA21Q3ZAQ7 101 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 TMEM78Q5T7P6 136 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 LINC00575Q6W349 94 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 FAM216BQ8N7L0 139 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 OTORQ9NRC9 128 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 SMPXQ9UHP9 88 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 V9GYQ6 96 aa0.76□□□□□ -2.29
CLK1-213ENST00000492793 ZNF469Q96JG9 3925 aaPredicted RBP0.75□□□□□ -2.29
CLK1-213ENST00000492793 SYNMO15061 1565 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 YTHDC2Q9H6S0 1430 aaKnown RBP0.75□□□□□ -2.29
CLK1-213ENST00000492793 A0A1W2PRE2 83 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 OR10AC1Q8NH08 325 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 BORCS8Q96FH0 119 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 SELENOSQ9BQE4 189 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 OR2H1Q9GZK4 316 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 NUBP2Q9Y5Y2 271 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 PIK3C2AO00443 1686 aa0.75□□□□□ -2.29
CLK1-213ENST00000492793 NUPR2A6NF83 97 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 H7BYZ3 331 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 PRR15Q8IV56 129 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 CENPHQ9H3R5 247 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 LAMTOR3Q9UHA4 124 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 NAT8BQ9UHF3 227 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 ATPIF1Q9UII2 106 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 HSPB8Q9UJY1 196 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 TPRKBQ9Y3C4 175 aa0.74□□□□□ -2.29
CLK1-213ENST00000492793 A0A1B0GV72 72 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 H3BQV1 296 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 CD14P08571 375 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 FABP2P12104 132 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 B2MP61769 119 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 DIAPH2-AS1Q14236 149 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 RMND5BQ96G75 393 aaPredicted RBP0.73□□□□□ -2.29
CLK1-213ENST00000492793 LRTM1Q9HBL6 345 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 TAF9BQ9HBM6 251 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 TANC2Q9HCD6 1990 aa0.73□□□□□ -2.29
CLK1-213ENST00000492793 NUP210Q8TEM1 1887 aaPredicted RBP0.73□□□□□ -2.29
CLK1-213ENST00000492793 TECPR2O15040 1411 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 RFX7Q2KHR2 1363 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 ANKRD31Q8N7Z5 1873 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 TRDV1A0A1B0GX56 115 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 C5orf58C9J3I9 102 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 IFNA21P01568 189 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 MIR22HGQ0VDD5 57 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 ANGPTL5Q86XS5 388 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 ISOC1Q96CN7 298 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 CCDC32Q9BV29 185 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 CST11Q9H112 138 aa0.72□□□□□ -2.29
CLK1-213ENST00000492793 BOKQ9UMX3 212 aaPredicted RBP0.72□□□□□ -2.29
CLK1-213ENST00000492793 TRPM1Q7Z4N2 1603 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 GABARAPH6UMI1 98 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 KPNA4O00629 521 aaPredicted RBP0.71□□□□□ -2.3
CLK1-213ENST00000492793 BCL2P10415 239 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 S100A11P31949 105 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 TFAMQ00059 246 aaKnown RBP0.71□□□□□ -2.3
CLK1-213ENST00000492793 OCIAD2Q56VL3 154 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 SPATA8Q6RVD6 105 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 GLIPR1L1Q6UWM5 242 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 HRCT1Q6UXD1 115 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 FOXI2Q6ZQN5 318 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 Q86TA4 180 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 OR4C12Q96R67 309 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 EFCAB11Q9BUY7 163 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 DDA1Q9BW61 102 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 LAMTOR2Q9Y2Q5 125 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 ZDBF2Q9HCK1 2354 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 ADGBQ8N7X0 1667 aa0.71□□□□□ -2.3
CLK1-213ENST00000492793 RTL9Q8NET4 1388 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 TENM3Q9P273 2699 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 NINQ8N4C6 2090 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 PBRM1Q86U86 1689 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 TRBV30A0A0K0K1B3 111 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 E7EQ34 232 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 H0YJX3 145 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 PFDN1O60925 122 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 FABP4P15090 132 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 FXYD4P59646 89 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 SMIM15Q7Z3B0 74 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 OR4B1Q8NGF8 309 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 GRPEL2Q8TAA5 225 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 THEM6Q8WUY1 208 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 NIT2Q9NQR4 276 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 ERBINQ96RT1 1412 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms