RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 U3KQK5 164 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 HSBP1L1C9JCN9 74 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 FAM106CPP0CH98 169 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 PRR25Q96S07 402 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 PMCHL2Q9BQD1 86 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 SMAD5-AS1Q9Y6J3 95 aa12.57□□□□□ -0.4
SEMA4D-220ENST00000492386 OOSP1A8MZH6 123 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 D6R8Y8 96 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 CCL25O15444 150 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 IFI27P40305 119 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 MPV17L2Q567V2 206 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 ARL6IP6Q8N6S5 226 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 ZNF738Q8NE65 137 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 A0A096LNJ9 63 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 IGHG4P01861 327 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 ZFP36P26651 326 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 RELQ04864 619 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 SAPCD1Q5SSQ6 148 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 MS4A6AQ9H2W1 248 aa12.56□□□□□ -0.4
SEMA4D-220ENST00000492386 IGHV7-81A0A0B4J1V7 117 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 NCR2O95944 276 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 LOXL1Q08397 574 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 AMN1Q8IY45 258 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 CSMD1Q96PZ7 3565 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 TMEM11P17152 192 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 Q8TAT8 98 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 VGLL1Q99990 258 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 RABAC1Q9UI14 185 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 MSRB2Q9Y3D2 182 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
SEMA4D-220ENST00000492386 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 IGFL4Q6B9Z1 124 aa12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 MUC21A0A0G2JKD1 596 aa12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 MUC21A0A140T8X8 626 aa12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 MUC21Q5SSG8 566 aa12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 PRELID3AQ96N28 172 aa12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
SEMA4D-220ENST00000492386 NBASA2RRP1 2371 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 LOC389332A0A1B0GUA5 103 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 FBLL1A6NHQ2 334 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 NUDT3O95989 172 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 HLA-DMBP28068 263 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 PTTG1IPP53801 180 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 UBE2V1Q13404 147 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 MRPL51Q4U2R6 128 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 BVES-AS1Q5T3Y7 98 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 ORMDL3Q8N138 153 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 Q8N9W7 124 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 WNK2Q9Y3S1 2297 aa12.53□□□□□ -0.4
SEMA4D-220ENST00000492386 SIRPDQ9H106 197 aa12.52□□□□□ -0.4
SEMA4D-220ENST00000492386 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
SEMA4D-220ENST00000492386 PSMG3-AS1Q96PY0 264 aa12.52□□□□□ -0.41
SEMA4D-220ENST00000492386 SCGB2A1O75556 95 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 IGLC6P0CF74 106 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 KLRB1Q12918 225 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 DTX2Q86UW9 622 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 IGHV3-35A0A0C4DH35 117 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 RPS20P60866 119 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 PAX8Q06710 450 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 FER1L6-AS1Q8NA97 138 aa12.51□□□□□ -0.41
SEMA4D-220ENST00000492386 IGF2RP11717 2491 aa12.5□□□□□ -0.41
SEMA4D-220ENST00000492386 ZNF502Q8TBZ5 544 aa12.5□□□□□ -0.41
SEMA4D-220ENST00000492386 AJUBAQ96IF1 538 aa12.5□□□□□ -0.41
SEMA4D-220ENST00000492386 A0A1W2PPR1 153 aa12.5□□□□□ -0.41
SEMA4D-220ENST00000492386 COX8AP10176 69 aa12.5□□□□□ -0.41
SEMA4D-220ENST00000492386 BMI1P35226 326 aa12.5□□□□□ -0.41
SEMA4D-220ENST00000492386 C12orf54Q6X4T0 127 aa12.5□□□□□ -0.41
SEMA4D-220ENST00000492386 TAX1BP3O14907 124 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 NDUFS7O75251 213 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 GPR183P32249 361 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 OR8A1Q8NGG7 326 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 FAM110DQ8TAY7 271 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 ZFAND3Q9H8U3 227 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 ATRXP46100 2492 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 A0A087X0K7 114 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 IGHV2-70DA0A0C4DH43 119 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 NPYP01303 97 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 SRSF2Q01130 221 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 FOXE3Q13461 319 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 TWIST1Q15672 202 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 KLK9Q2XQG4 91 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 C2orf91Q6ZV80 131 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 KLK9Q9UKQ9 250 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 RAXQ9Y2V3 346 aa12.49□□□□□ -0.41
SEMA4D-220ENST00000492386 SMKR1H3BMG3 65 aa12.48□□□□□ -0.41
SEMA4D-220ENST00000492386 DEFB125Q8N687 156 aa12.48□□□□□ -0.41
SEMA4D-220ENST00000492386 PRAC2D3DTV9 90 aa12.48□□□□□ -0.41
SEMA4D-220ENST00000492386 CKS2P33552 79 aa12.48□□□□□ -0.41
SEMA4D-220ENST00000492386 RHOGP84095 191 aa12.48□□□□□ -0.41
SEMA4D-220ENST00000492386 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms