RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	PGP	A6NDG6	321 aa		13.63	□□□□□ -0.23
SRM-206	ENST00000490101		F6UZH7	168 aa		13.63	□□□□□ -0.23
SRM-206	ENST00000490101	CLEC5A	Q9NY25	188 aa		13.63	□□□□□ -0.23
SRM-206	ENST00000490101	TMEM218	A2RU14	115 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	RPL11	P62913	178 aa	Known RBP	13.62	□□□□□ -0.23
SRM-206	ENST00000490101	DEFB114	Q30KQ6	69 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	SAMD13	Q5VXD3	122 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	ARL6IP6	Q8N6S5	226 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	C5orf17	Q8NAS9	161 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	DYNLRB2	Q8TF09	96 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	C11orf52	Q96A22	123 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	AAMDC	Q9H7C9	122 aa		13.62	□□□□□ -0.23
SRM-206	ENST00000490101	SOCS3	O14543	225 aa		13.61	□□□□□ -0.23
SRM-206	ENST00000490101	SLC25A5	P05141	298 aa	Known RBP	13.61	□□□□□ -0.23
SRM-206	ENST00000490101	EXOC3-AS1	Q8N2X6	119 aa		13.61	□□□□□ -0.23
SRM-206	ENST00000490101	ASCL2	Q99929	193 aa		13.61	□□□□□ -0.23
SRM-206	ENST00000490101	EPDR1	Q9UM22	224 aa		13.61	□□□□□ -0.23
SRM-206	ENST00000490101	PRELID1	Q9Y255	219 aa		13.61	□□□□□ -0.23
SRM-206	ENST00000490101	TRAV8-2	A0A0B4J237	113 aa		13.6	□□□□□ -0.23
SRM-206	ENST00000490101	TRAV25	A0A0B4J276	109 aa		13.6	□□□□□ -0.23
SRM-206	ENST00000490101	NHLRC4	P0CG21	123 aa	Predicted RBP	13.6	□□□□□ -0.23
SRM-206	ENST00000490101	CYB561D1	Q8N8Q1	229 aa		13.6	□□□□□ -0.23
SRM-206	ENST00000490101	C16orf92	Q96LL3	132 aa		13.6	□□□□□ -0.23
SRM-206	ENST00000490101	MS4A6A	Q9H2W1	248 aa		13.6	□□□□□ -0.23
SRM-206	ENST00000490101	SELENOK	Q9Y6D0	94 aa		13.6	□□□□□ -0.23
SRM-206	ENST00000490101		U3KQK5	164 aa		13.6	□□□□□ -0.23
SRM-206	ENST00000490101	TRAV2	A0A0B4J234	112 aa		13.59	□□□□□ -0.23
SRM-206	ENST00000490101	SCO2	A0A1W2PP80	73 aa		13.59	□□□□□ -0.23
SRM-206	ENST00000490101	ISLR	O14498	428 aa		13.59	□□□□□ -0.23
SRM-206	ENST00000490101	TSPAN4	O14817	238 aa		13.59	□□□□□ -0.23
SRM-206	ENST00000490101	SFTA3	P0C7M3	94 aa		13.59	□□□□□ -0.23
SRM-206	ENST00000490101	DCANP1	Q8TF63	244 aa		13.59	□□□□□ -0.23
SRM-206	ENST00000490101	HIST1H2BA	Q96A08	127 aa		13.59	□□□□□ -0.23
SRM-206	ENST00000490101	MRPL53	Q96EL3	112 aa	Known RBP	13.59	□□□□□ -0.23
SRM-206	ENST00000490101	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.59	□□□□□ -0.23
SRM-206	ENST00000490101	IGKV3-7	A0A075B6H7	116 aa		13.58	□□□□□ -0.24
SRM-206	ENST00000490101		K7EQG2	157 aa		13.58	□□□□□ -0.24
SRM-206	ENST00000490101	PEX7	O00628	323 aa		13.58	□□□□□ -0.24
SRM-206	ENST00000490101	PAFAH1B2	P68402	229 aa		13.58	□□□□□ -0.24
SRM-206	ENST00000490101	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.58	□□□□□ -0.24
SRM-206	ENST00000490101	TMEM61	Q8N0U2	210 aa		13.58	□□□□□ -0.24
SRM-206	ENST00000490101	GBGT1	Q8N5D6	347 aa		13.58	□□□□□ -0.24
SRM-206	ENST00000490101	CMTM2	Q8TAZ6	248 aa		13.58	□□□□□ -0.24
SRM-206	ENST00000490101	RPUSD4	Q96CM3	377 aa	Known RBP	13.58	□□□□□ -0.24
SRM-206	ENST00000490101	KRBOX1	C9JBD0	128 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101		M0R3E3	92 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	DNASE2	O00115	360 aa	Predicted RBP	13.57	□□□□□ -0.24
SRM-206	ENST00000490101	ATP6V1G1	O75348	118 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	SAP30	O75446	220 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	HLA-DMB	P28068	263 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	ID1	P41134	155 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	PSG3	Q16557	428 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	CD300E	Q496F6	205 aa	Predicted RBP	13.57	□□□□□ -0.24
SRM-206	ENST00000490101	SOHLH1	Q5JUK2	328 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	IGFL4	Q6B9Z1	124 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	OR2K2	Q8NGT1	345 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	C2CD4C	Q8TF44	421 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	ATG101	Q9BSB4	218 aa		13.57	□□□□□ -0.24
SRM-206	ENST00000490101	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.56	□□□□□ -0.24
SRM-206	ENST00000490101	IGLV1-51	P01701	117 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	TCRA	P04437	139 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	CSN1S1	P47710	185 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	GNG5	P63218	68 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	C10orf91	Q5T1B1	145 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	LCN12	Q6JVE5	192 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	RNF182	Q8N6D2	247 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	SEC11C	Q9BY50	192 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	KLF12	Q9Y4X4	402 aa		13.56	□□□□□ -0.24
SRM-206	ENST00000490101	SERTM2	A0A1B0GWG4	89 aa		13.55	□□□□□ -0.24
SRM-206	ENST00000490101	DIRC3	C9JPN6	131 aa		13.55	□□□□□ -0.24
SRM-206	ENST00000490101	INSL3	P51460	131 aa		13.55	□□□□□ -0.24
SRM-206	ENST00000490101	CEBPG	P53567	150 aa		13.55	□□□□□ -0.24
SRM-206	ENST00000490101	FAM74A3	Q4VXF1	159 aa		13.55	□□□□□ -0.24
SRM-206	ENST00000490101	WFDC3	Q8IUB2	231 aa		13.55	□□□□□ -0.24
SRM-206	ENST00000490101	SPAG8	Q99932	426 aa	Predicted RBP	13.55	□□□□□ -0.24
SRM-206	ENST00000490101	PARL	Q9H300	379 aa		13.55	□□□□□ -0.24
SRM-206	ENST00000490101		F8W036	122 aa		13.54	□□□□□ -0.24
SRM-206	ENST00000490101	ADCYAP1	P18509	176 aa		13.54	□□□□□ -0.24
SRM-206	ENST00000490101	TFPI2	P48307	235 aa		13.54	□□□□□ -0.24
SRM-206	ENST00000490101	CNN1	P51911	297 aa	Known RBP	13.54	□□□□□ -0.24
SRM-206	ENST00000490101	C20orf173	Q96LM9	149 aa		13.54	□□□□□ -0.24
SRM-206	ENST00000490101	LINC00052	Q96N35	136 aa		13.54	□□□□□ -0.24
SRM-206	ENST00000490101	DNAH7	Q8WXX0	4024 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	IZUMO1R	A6ND01	250 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	OR4C46	A6NHA9	309 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.53	□□□□□ -0.24
SRM-206	ENST00000490101	S100A9	P06702	114 aa	Known RBP	13.53	□□□□□ -0.24
SRM-206	ENST00000490101	AKR1C3	P42330	323 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	GOLT1A	Q6ZVE7	132 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	SMIM7	Q9BQ49	75 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	DERL1	Q9BUN8	251 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	RPH3AL	Q9UNE2	315 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.53	□□□□□ -0.24
SRM-206	ENST00000490101	SORL1	Q92673	2214 aa		13.53	□□□□□ -0.24
SRM-206	ENST00000490101	ZNF727	A8MUV8	499 aa		13.52	□□□□□ -0.25
SRM-206	ENST00000490101		K7EQM0	130 aa		13.52	□□□□□ -0.25
SRM-206	ENST00000490101	S100A1	P23297	94 aa		13.52	□□□□□ -0.25
SRM-206	ENST00000490101	RPL35	P42766	123 aa	Known RBP	13.52	□□□□□ -0.25
SRM-206	ENST00000490101	TAS2R60	P59551	318 aa		13.52	□□□□□ -0.25
SRM-206	ENST00000490101	SNRPD3	P62318	126 aa	Known RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms