RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ZNF431Q8TF32 576 aaPredicted RBP9.49□□□□□ -0.89
VARS-227ENST00000489979 PYGO2Q9BRQ0 406 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 GSN-AS1Q9NRJ2 163 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 ICOSQ9Y6W8 199 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 TRGV1A0A0A0MS02 117 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 H3BMQ9 156 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 SLC17A3O00476 420 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 PAX4O43316 350 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 CCNKO75909 580 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 LEPP41159 167 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 SLC38A11Q08AI6 406 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 LINC00305Q7Z4B0 112 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 ZBTB8BQ8NAP8 495 aaPredicted RBP9.48□□□□□ -0.89
VARS-227ENST00000489979 PSENENQ9NZ42 101 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 NDUFA13Q9P0J0 144 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 RSL24D1Q9UHA3 163 aaKnown RBP9.48□□□□□ -0.89
VARS-227ENST00000489979 RNF24Q9Y225 148 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 FUT9Q9Y231 359 aa9.48□□□□□ -0.89
VARS-227ENST00000489979 ZNF324O75467 553 aaPredicted RBP9.47□□□□□ -0.89
VARS-227ENST00000489979 SFT2D2O95562 160 aa9.47□□□□□ -0.89
VARS-227ENST00000489979 POLR2GP62487 172 aaKnown RBP eCLIP9.47□□□□□ -0.89
VARS-227ENST00000489979 BPIFA4PQ86YQ2 179 aa9.47□□□□□ -0.89
VARS-227ENST00000489979 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
VARS-227ENST00000489979 ZNF680Q8NEM1 530 aa9.47□□□□□ -0.89
VARS-227ENST00000489979 ODF3Q96PU9 254 aa9.47□□□□□ -0.89
VARS-227ENST00000489979 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 IGHV3-53P01767 116 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 ID3Q02535 119 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 PPP1R1AQ13522 171 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 TEPPQ6URK8 271 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 MCFD2Q8NI22 146 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 DYNC2LI1Q8TCX1 351 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 NPVFQ9HCQ7 196 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 KLF12Q9Y4X4 402 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 PXMP4Q9Y6I8 212 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 LY96Q9Y6Y9 160 aa9.46□□□□□ -0.9
VARS-227ENST00000489979 NPIPB6E9PJ23 425 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 K7EPK0 472 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 SSSCA1O60232 199 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 METTL15P1P0C7V9 234 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 S100A5P33763 92 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 PXDC1Q5TGL8 231 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 MORN5Q5VZ52 161 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 SAT2Q96F10 170 aaPredicted RBP9.45□□□□□ -0.9
VARS-227ENST00000489979 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 MSRB1Q9NZV6 116 aa9.45□□□□□ -0.9
VARS-227ENST00000489979 C7orf71A4D174 169 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 FNDC10F2Z333 226 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 H3BQ15 152 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 GOSR2O14653 212 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 COX7A2P2O60397 106 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 SPINK4O60575 86 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 SLC25A5P05141 298 aaKnown RBP9.44□□□□□ -0.9
VARS-227ENST00000489979 IGLC2P0DOY2 106 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 FAUP35544 74 aaKnown RBP9.44□□□□□ -0.9
VARS-227ENST00000489979 OPCMLQ14982 345 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 EIF4E3Q8N5X7 224 aaKnown RBP9.44□□□□□ -0.9
VARS-227ENST00000489979 TMEM37Q8WXS4 190 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 ST6GAL2Q96JF0 529 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 SOSTQ9BQB4 213 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 MGAT4CQ9UBM8 478 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 PRO0255Q9UI72 69 aa9.44□□□□□ -0.9
VARS-227ENST00000489979 HMCN2Q8NDA2 5059 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 UBR4Q5T4S7 5183 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 FABP12A6NFH5 140 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 AGPAT2O15120 278 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 PRAF2O60831 178 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 CRYBA4P53673 196 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 TCL1AP56279 114 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 MRPL23Q16540 153 aaKnown RBP9.43□□□□□ -0.9
VARS-227ENST00000489979 ANXA2RQ3ZCQ2 193 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 C4orf46Q504U0 113 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 TMEM14EPQ6UXP3 125 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 ZNF546Q86UE3 836 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 OR10P1Q8NGE3 313 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 SMIM8Q96KF7 97 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
VARS-227ENST00000489979 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 CD300CQ08708 224 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 ERCC8Q13216 396 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 SLAQ13239 276 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 C10orf113Q5VZT2 155 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 NEGR1Q7Z3B1 354 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 WFDC10BQ8IUB3 73 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 SLC25A21Q9BQT8 299 aaPredicted RBP9.42□□□□□ -0.9
VARS-227ENST00000489979 TMEM70Q9BUB7 260 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 MRPL16Q9NX20 251 aaKnown RBP9.42□□□□□ -0.9
VARS-227ENST00000489979 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
VARS-227ENST00000489979 KLLNB2CW77 178 aa9.41□□□□□ -0.9
VARS-227ENST00000489979 EVI2AP22794 236 aa9.41□□□□□ -0.9
VARS-227ENST00000489979 TNFSF8P32971 234 aa9.41□□□□□ -0.9
VARS-227ENST00000489979 RNASE4P34096 147 aaKnown RBP9.41□□□□□ -0.9
VARS-227ENST00000489979 ARL16Q0P5N6 197 aa9.41□□□□□ -0.9
VARS-227ENST00000489979 FHL2Q14192 279 aa9.41□□□□□ -0.9
VARS-227ENST00000489979 TOMM5Q8N4H5 51 aa9.41□□□□□ -0.9
VARS-227ENST00000489979 SLIRPQ9GZT3 109 aaKnown RBP9.41□□□□□ -0.9
VARS-227ENST00000489979 TP53TG3Q9ULZ0 132 aa9.41□□□□□ -0.9
VARS-227ENST00000489979 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms