RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 A8MTW9 85 aa11.07□□□□□ -0.64
FDPS-213ENST00000489003 DUSP14O95147 198 aaKnown RBP11.07□□□□□ -0.64
FDPS-213ENST00000489003 CA1P00915 261 aaPredicted RBP11.07□□□□□ -0.64
FDPS-213ENST00000489003 STAG3L2P0CL84 134 aa11.07□□□□□ -0.64
FDPS-213ENST00000489003 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
FDPS-213ENST00000489003 C4BPBP20851 252 aa11.07□□□□□ -0.64
FDPS-213ENST00000489003 EXOC3-AS1Q8N2X6 119 aa11.07□□□□□ -0.64
FDPS-213ENST00000489003 ACTR3CQ9C0K3 210 aaPredicted RBP11.07□□□□□ -0.64
FDPS-213ENST00000489003 PFDN1O60925 122 aa11.06□□□□□ -0.64
FDPS-213ENST00000489003 CNN1P51911 297 aaKnown RBP11.06□□□□□ -0.64
FDPS-213ENST00000489003 FXYD7P58549 80 aa11.06□□□□□ -0.64
FDPS-213ENST00000489003 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
FDPS-213ENST00000489003 PQLC2Q6ZP29 291 aa11.06□□□□□ -0.64
FDPS-213ENST00000489003 SSX7Q7RTT5 188 aa11.06□□□□□ -0.64
FDPS-213ENST00000489003 CSNK1G2-AS1Q8NCQ2 148 aa11.06□□□□□ -0.64
FDPS-213ENST00000489003 M0R3E3 92 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 SEC11BP0C7V7 166 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
FDPS-213ENST00000489003 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
FDPS-213ENST00000489003 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
FDPS-213ENST00000489003 HIST1H1AQ02539 215 aaPredicted RBP11.05□□□□□ -0.64
FDPS-213ENST00000489003 ICAM4Q14773 271 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 ZNF726P1Q15940 193 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 SLC35B3Q9H1N7 401 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 XCL2Q9UBD3 114 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 PRELID1Q9Y255 219 aa11.05□□□□□ -0.64
FDPS-213ENST00000489003 EIF5AP63241 154 aaKnown RBP11.04□□□□□ -0.64
FDPS-213ENST00000489003 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
FDPS-213ENST00000489003 BAP18Q8IXM2 172 aa11.04□□□□□ -0.64
FDPS-213ENST00000489003 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
FDPS-213ENST00000489003 CTXND1A0A1B0GTU2 59 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 ARL14EPLP0DKL9 152 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 LYPD1Q8N2G4 141 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 C9orf62Q8N4C0 152 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
FDPS-213ENST00000489003 RARRES2Q99969 163 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 C1QTNF4Q9BXJ3 329 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 AAMDCQ9H7C9 122 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 EDA2RQ9HAV5 297 aa11.03□□□□□ -0.64
FDPS-213ENST00000489003 PGPA6NDG6 321 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 CXorf1O96002 111 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 TPT1P13693 172 aaKnown RBP11.02□□□□□ -0.65
FDPS-213ENST00000489003 GCHFRP30047 84 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 ZFP69Q49AA0 526 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 OR10J6PQ8NGY7 276 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 STOML3Q8TAV4 291 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 WWC2-AS2Q96NR7 200 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 Q9H3A6 140 aa11.02□□□□□ -0.65
FDPS-213ENST00000489003 CT45A10P0DMU9 189 aa11.01□□□□□ -0.65
FDPS-213ENST00000489003 ERCC8Q13216 396 aa11.01□□□□□ -0.65
FDPS-213ENST00000489003 AGPAT4-IT1Q9H0P7 198 aa11.01□□□□□ -0.65
FDPS-213ENST00000489003 ZNF705EA8MWA4 302 aaPredicted RBP11□□□□□ -0.65
FDPS-213ENST00000489003 M0R2Z0 102 aa11□□□□□ -0.65
FDPS-213ENST00000489003 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
FDPS-213ENST00000489003 FHITP49789 147 aa11□□□□□ -0.65
FDPS-213ENST00000489003 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
FDPS-213ENST00000489003 TMED6Q8WW62 240 aa11□□□□□ -0.65
FDPS-213ENST00000489003 TMPRSS5Q9H3S3 457 aa11□□□□□ -0.65
FDPS-213ENST00000489003 OTORQ9NRC9 128 aa11□□□□□ -0.65
FDPS-213ENST00000489003 TMEM167BQ9NRX6 74 aa11□□□□□ -0.65
FDPS-213ENST00000489003 PPP1R14DQ9NXH3 145 aa11□□□□□ -0.65
FDPS-213ENST00000489003 X6R8D5 127 aa11□□□□□ -0.65
FDPS-213ENST00000489003 UMAD1C9J7I0 102 aa10.99□□□□□ -0.65
FDPS-213ENST00000489003 NPIPB6E9PJ23 425 aa10.99□□□□□ -0.65
FDPS-213ENST00000489003 BOLA2-SMG1P6H3BVE0 249 aa10.99□□□□□ -0.65
FDPS-213ENST00000489003 FGF8P55075 233 aaPredicted RBP10.99□□□□□ -0.65
FDPS-213ENST00000489003 SLC51BQ86UW2 128 aa10.99□□□□□ -0.65
FDPS-213ENST00000489003 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
FDPS-213ENST00000489003 RXFP4Q8TDU9 374 aa10.99□□□□□ -0.65
FDPS-213ENST00000489003 LINC00477Q96M19 166 aa10.99□□□□□ -0.65
FDPS-213ENST00000489003 DIRC3C9JPN6 131 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 AMBPP02760 352 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 CSN1S1P47710 185 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 NKX2-5P52952 324 aaPredicted RBP10.98□□□□□ -0.65
FDPS-213ENST00000489003 KIR3DS1Q14943 382 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 ZNF705AQ6ZN79 300 aaPredicted RBP10.98□□□□□ -0.65
FDPS-213ENST00000489003 C9orf47Q6ZRZ4 202 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 MBD3L1Q8WWY6 194 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 IGF2BP2-AS1Q96M15 143 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 VGLL1Q99990 258 aa10.98□□□□□ -0.65
FDPS-213ENST00000489003 STAB2Q8WWQ8 2551 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 TRAV12-2A0A075B6T6 113 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 IGKV2-40A0A087WW87 121 aaPredicted RBP10.97□□□□□ -0.65
FDPS-213ENST00000489003 A0A0J9YWU9 116 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 MAP1LC3B2A6NCE7 125 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 IGKV2D-40P01614 121 aaPredicted RBP10.97□□□□□ -0.65
FDPS-213ENST00000489003 CDKN1BP46527 198 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 FAM74A1Q5RGS3 127 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 DPPA3Q6W0C5 159 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 ARL6IP6Q8N6S5 226 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 MAP1LC3BQ9GZQ8 125 aa10.97□□□□□ -0.65
FDPS-213ENST00000489003 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.65
FDPS-213ENST00000489003 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.65
FDPS-213ENST00000489003 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.65
FDPS-213ENST00000489003 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.65
FDPS-213ENST00000489003 EIF5AL1Q6IS14 154 aaKnown RBP10.96□□□□□ -0.65
FDPS-213ENST00000489003 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
FDPS-213ENST00000489003 FAM213BQ8TBF2 198 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms